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LOCUS EU031842 410 bp RNA linear VRL 13-AUG-2007
DEFINITION HIV-1 isolate 01AOCSE118 from Angola envelope glycoprotein (env)
gene, partial cds
ACCESSION EU031842
VERSION EU031842.1 GI:154721278
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 410)
Show all sequences for reference 1
AUTHORS Bartolo,I., Rocha,C., Bartolomeu,J., Gama,A., Marcelino,R.,
Fonseca,M., Mendes,A., Epalanga,M., Silva,P.C. and Taveira,N.
TITLE Highly divergent subtypes and new recombinant forms prevail in the
HIV/AIDS epidemic in Angola: New insights into the origins of the
AIDS pandemic.
JOURNAL Infect Genet Evol. 2008 May 9.
PUBMED 18562253
REFERENCE 2 (bases 1 to 410)
Show all sequences for reference 2
AUTHORS Bartolo,I., Rocha,C., Bartolomeu,J., Gama,A., Marcelino,R.,
Fonseca,M., Mendes,A., Epalanga,M. and Taveira,N.
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2007) Microbiologia, Faculdade de Farmacia de
Lisboa, Avenida das Forcas Armadas, Lisboa 1649-019, Portugal
REFERENCE 3
Show all sequences for reference 3
AUTHORS Martin,F., Marcelino,J.M., Palladino,C., Bartolo,I., Tracana,S.,
Moranguinho,I., Goncalves,P., Mateus,R., Calado,R., Borrego,P.,
Leitner,T., Clemente,S. and Taveira,N.
TITLE Long-Term and Low-Level Envelope C2V3 Stimulation by Highly Diverse
Virus Isolates Leads to Frequent Development of Broad and Elite
Antibody Neutralization in HIV-1-Infected Individuals.
JOURNAL Microbiol. Spectr.. 10(6); e0163422 (2022)
PUBMED 36445130
FEATURES Location/Qualifiers
source 1..410
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="01AOCSE118"
/db_xref="taxon:11676"
/country="Angola"
/note="genotype: A1"
gene <1..>410
/gene="env"
CDS <1..>410
/gene="env"
/note="C2C3 region; gp120"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABS84770.1"
/db_xref="GI:154721279"
/translation="QCTHGIRPVASTQLLLNGSLAEGKVAIRSENISNNAKNIIVQFV
EPVTITCIRPNNNTRKSVRIGPGQVFYATGEIIGNIREAHCNVSGTKWNETLKQVAKQ
LHSQFENKTIIFDKASGGDLEVTTHSFNCGGEFF"
BASE COUNT 162 a 62 c 83 g 103 t
ORIGIN
1 acaatgtaca catggaatta ggccagtagc atcaactcaa ctgctgttaa atggcagtct
61 agcagaagga aaggtagcaa ttagatctga aaatatctca aacaatgcca aaaacataat
121 agtacagttt gttgagcctg ttaccattac ttgtatccga cctaacaata atacaagaaa
181 aagtgtacgt ataggaccag gacaagtatt ctatgcaaca ggtgaaataa taggaaatat
241 aagagaggca cattgtaatg tcagtggaac aaagtggaat gaaactttga aacaggtagc
301 taaacaatta catagccagt ttgagaacaa aacaataatc tttgataaag cctcaggagg
361 ggatttagaa gttacaacac atagttttaa ttgtggagga gaatttttct
//
last modified: Tue May 31 10:56 2022