HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    EU031842		     410 bp    RNA     linear	VRL 13-AUG-2007
DEFINITION  HIV-1 isolate 01AOCSE118 from Angola envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   EU031842
VERSION     EU031842.1 GI:154721278
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 410)
            Show all sequences for reference 1
  AUTHORS   Bartolo,I., Rocha,C., Bartolomeu,J., Gama,A., Marcelino,R.,
	    Fonseca,M., Mendes,A., Epalanga,M., Silva,P.C. and Taveira,N.
  TITLE     Highly divergent subtypes and new recombinant forms prevail in the
	    HIV/AIDS epidemic in Angola: New insights into the origins of the
	    AIDS pandemic.
  JOURNAL   Infect Genet Evol. 2008 May 9.
  PUBMED    18562253
REFERENCE   2 (bases 1 to 410)
            Show all sequences for reference 2
  AUTHORS   Bartolo,I., Rocha,C., Bartolomeu,J., Gama,A., Marcelino,R.,
	    Fonseca,M., Mendes,A., Epalanga,M. and Taveira,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUL-2007) Microbiologia, Faculdade de Farmacia de
	    Lisboa, Avenida das Forcas Armadas, Lisboa 1649-019, Portugal
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Martin,F., Marcelino,J.M., Palladino,C., Bartolo,I., Tracana,S.,
	    Moranguinho,I., Goncalves,P., Mateus,R., Calado,R., Borrego,P.,
	    Leitner,T., Clemente,S. and Taveira,N.
  TITLE     Long-Term and Low-Level Envelope C2V3 Stimulation by Highly Diverse
	    Virus Isolates Leads to Frequent Development of Broad and Elite
	    Antibody Neutralization in HIV-1-Infected Individuals.
  JOURNAL   Microbiol. Spectr.. 10(6); e0163422 (2022)
  PUBMED    36445130
FEATURES             Location/Qualifiers
     source	     1..410
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="01AOCSE118"
		     /db_xref="taxon:11676"
		     /country="Angola"
		     /note="genotype: A1"
     gene	     <1..>410
		     /gene="env"
     CDS	     <1..>410
		     /gene="env"
		     /note="C2C3 region; gp120"
		     /codon_start="2"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ABS84770.1"
		     /db_xref="GI:154721279"
		     /translation="QCTHGIRPVASTQLLLNGSLAEGKVAIRSENISNNAKNIIVQFV
		     EPVTITCIRPNNNTRKSVRIGPGQVFYATGEIIGNIREAHCNVSGTKWNETLKQVAKQ
		     LHSQFENKTIIFDKASGGDLEVTTHSFNCGGEFF"
BASE COUNT	162 a	  62 c	   83 g    103 t
ORIGIN
       1 acaatgtaca catggaatta ggccagtagc atcaactcaa ctgctgttaa atggcagtct 
      61 agcagaagga aaggtagcaa ttagatctga aaatatctca aacaatgcca aaaacataat 
     121 agtacagttt gttgagcctg ttaccattac ttgtatccga cctaacaata atacaagaaa 
     181 aagtgtacgt ataggaccag gacaagtatt ctatgcaaca ggtgaaataa taggaaatat 
     241 aagagaggca cattgtaatg tcagtggaac aaagtggaat gaaactttga aacaggtagc 
     301 taaacaatta catagccagt ttgagaacaa aacaataatc tttgataaag cctcaggagg 
     361 ggatttagaa gttacaacac atagttttaa ttgtggagga gaatttttct 
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.