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LOCUS	    EF583789		     640 bp    RNA     linear	VRL 02-JAN-2008
DEFINITION  HIV-1 isolate ABB115-98 from Cameroon envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   EF583789
VERSION     EF583789.1 GI:156858191
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 640)
            Show all sequences for reference 1
  AUTHORS   Eshleman,S.H., Hudelson,S.E., Bruce,R., Lee,T., Owens,M.R.,
	    Hackett,J., Swanson,P., Devare,S.G. and Marlowe,N.
  TITLE     Analysis of HIV Type 1 gp41 Sequences in Diverse HIV Type 1 Strains
  JOURNAL   AIDS Res. Hum. Retroviruses 23 (12), 1593-1598 (2007)
  PUBMED    18160019
REFERENCE   2 (bases 1 to 640)
            Show all sequences for reference 2
  AUTHORS   Eshleman,S.H., Hudleson,S.E., Bruce,R., Lee,T., Owens,M.R.,
	    Hackett,J. Jr.., Swanson,P., Devare,S.G. and Marlowe,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-APR-2007) Department of Pathology, The Johns Hopkins
	    Medical Institutions, Ross Building 646, 720 Rutland Avenue,
	    Baltimore, MD 21205, USA
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Brennan,C.A., Bodelle,P., Coffey,R., Devare,S.G., Golden,A.,
	    Hackett,J.J., Harris,B., Holzmayer,V., Luk,K.-C., Schochetman,G.,
	    Swanson,P., Yamaguchi,J., Vallari,A., Ndembi,N., Ngansop,C.,
	    Makamche,F., Mbanya,D., Gurtler,L.G., Zekeng,L. and Kaptue,L.
  TITLE     The prevalence of diverse HIV-1 strains was stable in Cameroonian
	    blood donors from 1996 to 2004.
  JOURNAL   J. Acquir. Immune Defic. Syndr.. 49(4); 432-9 (2008)
  PUBMED    18931623
FEATURES             Location/Qualifiers
     source	     1..640
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="ABB115-98"
		     /db_xref="taxon:11676"
		     /country="Cameroon"
     gene	     <1..>640
		     /gene="env"
     CDS	     <1..>640
		     /gene="env"
		     /note="gp41"
		     /codon_start="2"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ABU96438.1"
		     /db_xref="GI:156858192"
		     /translation="LGIAPTRAKRRVVEREKRAIGLGAXFLGFLGAAGSTMGAASVTL
		     TVQARQLLSGIVQQQNNLLXAIXAQXHLLQLTVWGIKXLQAXILAVEXYLXDQQLLGI
		     WGCSGKHICTTNVPWNSSWSNRSLDDIWQNMTWMQWEKEIENYTGXIYXLIEESQIQQ
		     EKNEKELLELDKWASLWNWFTISNWLWYIKIFIMIVGGLIGLRIVFAVLSJVN"
BASE COUNT	207 a	 101 c	  160 g    155 t     17 other
ORIGIN
       1 actaggrata gcacccacca gggcaaagag aagagtggtg gaaagagaaa aaagagcaat 
      61 aggactagga gctrtgttcc ttgggttctt gggagcagca ggaagcacga tgggcgcagc 
     121 gtcagtgacg ytgacggtac aggccagaca attattgtct ggtatagtgc aacagcaaaa 
     181 taatttgctg arggctatag akgcgcaaca kcatctgttg caactcacgg tctggggcat 
     241 taaacakctc caggcaagwa tcctggctgt ggaawkmtac ctraakgatc aacagctcct 
     301 aggaatttgg ggttgctctg ggaaacacat ctgcaccact aatgtgccct ggaattctag 
     361 ttggagtaat agatctctag atgacatttg gcagaacatg acctggatgc aatgggagaa 
     421 agaaattgag aattacacag gtgyaatata camtttaatt gaagaatcac aaatccagca 
     481 agagaaaaat gaaaaagaat tattagaatt ggacaagtgg gcaagtttgt ggaattggtt 
     541 tacyatatct aactggctgt ggtatataaa aatattcatc atgatagtag gaggcttaat 
     601 aggtttaaga atagtttttg ctgtgctttc tmtagtaaat 
//
last modified: Tue May 31 10:56 2022


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