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LOCUS EF583789 640 bp RNA linear VRL 02-JAN-2008
DEFINITION HIV-1 isolate ABB115-98 from Cameroon envelope glycoprotein (env)
gene, partial cds
ACCESSION EF583789
VERSION EF583789.1 GI:156858191
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 640)
Show all sequences for reference 1
AUTHORS Eshleman,S.H., Hudelson,S.E., Bruce,R., Lee,T., Owens,M.R.,
Hackett,J., Swanson,P., Devare,S.G. and Marlowe,N.
TITLE Analysis of HIV Type 1 gp41 Sequences in Diverse HIV Type 1 Strains
JOURNAL AIDS Res. Hum. Retroviruses 23 (12), 1593-1598 (2007)
PUBMED 18160019
REFERENCE 2 (bases 1 to 640)
Show all sequences for reference 2
AUTHORS Eshleman,S.H., Hudleson,S.E., Bruce,R., Lee,T., Owens,M.R.,
Hackett,J. Jr.., Swanson,P., Devare,S.G. and Marlowe,N.
TITLE Direct Submission
JOURNAL Submitted (27-APR-2007) Department of Pathology, The Johns Hopkins
Medical Institutions, Ross Building 646, 720 Rutland Avenue,
Baltimore, MD 21205, USA
REFERENCE 3
Show all sequences for reference 3
AUTHORS Brennan,C.A., Bodelle,P., Coffey,R., Devare,S.G., Golden,A.,
Hackett,J.J., Harris,B., Holzmayer,V., Luk,K.-C., Schochetman,G.,
Swanson,P., Yamaguchi,J., Vallari,A., Ndembi,N., Ngansop,C.,
Makamche,F., Mbanya,D., Gurtler,L.G., Zekeng,L. and Kaptue,L.
TITLE The prevalence of diverse HIV-1 strains was stable in Cameroonian
blood donors from 1996 to 2004.
JOURNAL J. Acquir. Immune Defic. Syndr.. 49(4); 432-9 (2008)
PUBMED 18931623
FEATURES Location/Qualifiers
source 1..640
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="ABB115-98"
/db_xref="taxon:11676"
/country="Cameroon"
gene <1..>640
/gene="env"
CDS <1..>640
/gene="env"
/note="gp41"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABU96438.1"
/db_xref="GI:156858192"
/translation="LGIAPTRAKRRVVEREKRAIGLGAXFLGFLGAAGSTMGAASVTL
TVQARQLLSGIVQQQNNLLXAIXAQXHLLQLTVWGIKXLQAXILAVEXYLXDQQLLGI
WGCSGKHICTTNVPWNSSWSNRSLDDIWQNMTWMQWEKEIENYTGXIYXLIEESQIQQ
EKNEKELLELDKWASLWNWFTISNWLWYIKIFIMIVGGLIGLRIVFAVLSJVN"
BASE COUNT 207 a 101 c 160 g 155 t 17 other
ORIGIN
1 actaggrata gcacccacca gggcaaagag aagagtggtg gaaagagaaa aaagagcaat
61 aggactagga gctrtgttcc ttgggttctt gggagcagca ggaagcacga tgggcgcagc
121 gtcagtgacg ytgacggtac aggccagaca attattgtct ggtatagtgc aacagcaaaa
181 taatttgctg arggctatag akgcgcaaca kcatctgttg caactcacgg tctggggcat
241 taaacakctc caggcaagwa tcctggctgt ggaawkmtac ctraakgatc aacagctcct
301 aggaatttgg ggttgctctg ggaaacacat ctgcaccact aatgtgccct ggaattctag
361 ttggagtaat agatctctag atgacatttg gcagaacatg acctggatgc aatgggagaa
421 agaaattgag aattacacag gtgyaatata camtttaatt gaagaatcac aaatccagca
481 agagaaaaat gaaaaagaat tattagaatt ggacaagtgg gcaagtttgt ggaattggtt
541 tacyatatct aactggctgt ggtatataaa aatattcatc atgatagtag gaggcttaat
601 aggtttaaga atagtttttg ctgtgctttc tmtagtaaat
//
last modified: Tue May 31 10:56 2022