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LOCUS EF449886 971 bp RNA linear VRL 13-AUG-2008
DEFINITION HIV-1 isolate 662077 from Switzerland pol protein (pol) gene,
partial cds
ACCESSION EF449886
VERSION EF449886.1 GI:134023373
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 971)
Show all sequences for reference 1
AUTHORS von Wyl,V., Yerly,S., Boni,J., Burgisser,P., Klimkait,T.,
Battegay,M., Furrer,H., Telenti,A., Hirschel,B., Vernazza,P.L.,
Bernasconi,E., Rickenbach,M., Perrin,L., Ledergerber,B. and
Gunthard,H.F.
CONSRTM for the Swiss HIV Cohort Study
TITLE Emergence of HIV-1 drug resistance in previously untreated patients
initiating combination antiretroviral treatment: a comparison of
different regimen types
JOURNAL Arch. Intern. Med. 167 (16), 1782-1790 (2007)
PUBMED 17846398
REFERENCE 2 (bases 1 to 971)
Show all sequences for reference 2
AUTHORS von Wyl,V., Yerly,S., Boeni,J., Buergisser,P., Klimkait,T.,
Battegay,M., Furrer,H., Telenti,A., Hirschel,B., Vernazza,P.L.,
Bernasconi,E., Rickenbach,M., Perrin,L., Ledergerber,B. and
Guenthard,H.F.
CONSRTM Swiss HIV Cohort Study
TITLE Direct Submission
JOURNAL Submitted (22-FEB-2007) Division of Infectious Diseases and
Hospital Epidemiology, University Hospital Zurich, Raemistrasse
100, Zurich CH-8091, Switzerland
FEATURES Location/Qualifiers
source 1..971
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="662077"
/db_xref="taxon:11676"
/country="Switzerland"
/collection_date="2001"
gene <1..>971
/gene="pol"
CDS <1..>971
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABO45544.1"
/db_xref="GI:134023374"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVVEEMNLPGRWKP
KMIGGIGGFIKVRQYDQIXIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIXTVPVXLXPGMDGPRVKQWPLTEEKIKALIEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTXILEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRAKIENLRQHLLRWGLTTPDKKHQKEP"
BASE COUNT 378 a 152 c 197 g 228 t 16 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtagtag aagaaatgaa tttgccagga
121 agatggaagc caaaaatgat agggggaatt ggaggtttta ttaaagtaag acagtatgat
181 cagatacmaa tagaaatctg tggrcataaa gctataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gttgtactyt aaattttccc
301 attagtccta ttgamactgt accagtaara ttaaamccag gaatggatgg cccaagagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattaa tagaaatttg tacagaaatg
421 gaaaaggaag graaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttytg ggaagttcaa ttaggaatac cacatcccgc rgggttaaaa
601 aagaaaaaat cagtaactgt attggatgtg ggtgatgcat atttttcagt tcccttagay
661 aaagacttca ggaagtatac tgcatttacc atacctagta taaacaatga gacaccaggg
721 attagatatc artacaatgt gctrccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga camraatctt agagcctttt agaaaacaaa atccagacat agtcatctat
841 caatacatgg atgatttgta tgtaggmtct gacttagaaa tagggcagca tagagcaaaa
901 atagaaaatt tgagacagca tctattgagg tggggactta ccacaccaga caaaaaacat
961 cagaargaac c
//
last modified: Tue May 31 10:56 2022