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LOCUS EF449812 971 bp RNA linear VRL 13-AUG-2008
DEFINITION HIV-1 isolate 661753 from Switzerland pol protein (pol) gene,
partial cds
ACCESSION EF449812
VERSION EF449812.1 GI:134023225
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 971)
Show all sequences for reference 1
AUTHORS von Wyl,V., Yerly,S., Boni,J., Burgisser,P., Klimkait,T.,
Battegay,M., Furrer,H., Telenti,A., Hirschel,B., Vernazza,P.L.,
Bernasconi,E., Rickenbach,M., Perrin,L., Ledergerber,B. and
Gunthard,H.F.
CONSRTM for the Swiss HIV Cohort Study
TITLE Emergence of HIV-1 drug resistance in previously untreated patients
initiating combination antiretroviral treatment: a comparison of
different regimen types
JOURNAL Arch. Intern. Med. 167 (16), 1782-1790 (2007)
PUBMED 17846398
REFERENCE 2 (bases 1 to 971)
Show all sequences for reference 2
AUTHORS von Wyl,V., Yerly,S., Boeni,J., Buergisser,P., Klimkait,T.,
Battegay,M., Furrer,H., Telenti,A., Hirschel,B., Vernazza,P.L.,
Bernasconi,E., Rickenbach,M., Perrin,L., Ledergerber,B. and
Guenthard,H.F.
CONSRTM Swiss HIV Cohort Study
TITLE Direct Submission
JOURNAL Submitted (22-FEB-2007) Division of Infectious Diseases and
Hospital Epidemiology, University Hospital Zurich, Raemistrasse
100, Zurich CH-8091, Switzerland
FEATURES Location/Qualifiers
source 1..971
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="661753"
/db_xref="taxon:11676"
/country="Switzerland"
/collection_date="2002"
gene <1..>971
/gene="pol"
CDS <1..>971
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABO45470.1"
/db_xref="GI:134023226"
/translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEDMHLPGKWRP
KMIGGIGGFIKVKQYDQVPIEICGHKTIGTVLVGPTPVNIIGRNLLTQLGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALMEICAEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKXFRKYTAFTIPSXNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFREQNPD
IVIYQYMDDLYXGSDLEIGQHRTKIEELRXHLLRWGFTTPDKKHQKEP"
BASE COUNT 376 a 155 c 199 g 221 t 20 other
ORIGIN
1 cctcaratca ctctttggca acgacccctc gtcacagtaa aaataggggg gcarctaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagacatgca tttgccaggr
121 aaatggagac caaaaatgat agggggaatt ggaggtttta tcaaagtaaa acagtatgat
181 caggtgccca tagaaatctg tggacataaa actataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagcttg gttgcacttt aaattttccc
301 attagtccta ttgaractgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattaa tggaaatctg tgcagaaatg
421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaargacag tactaaatgg agaaagttag tagatttyag agaacttaat
541 aagaaaactc aagacttctg ggaagtccaa ttaggaatac cacatcccgc agggttaaaa
601 aagaaaaaat cagtaacagt actggatgtg ggagatgcat ayttttcagt ccctttagat
661 aaagamttca ggaagtatac tgcatttacc atacctagta yaaacaatga gacaccaggg
721 attagrtatc agtayaaygt rcttccacag ggatggaaag gatcaccagc aatattycaa
781 agtagyatga caaaaatctt agagcctttt agagaacaaa atccagacat agttatctat
841 caatacatgg atgatttgta trtaggrtct gacttagaaa tagggcagca tagaacaaaa
901 atagaggaac tgagagmaca tytgttgagg tgggggttta ccacaccaga caaaaaacay
961 cagaaagaac c
//
last modified: Tue May 31 10:56 2022