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LOCUS EF449777 971 bp RNA linear VRL 13-AUG-2008
DEFINITION HIV-1 isolate 4815822 from Switzerland pol protein (pol) gene,
partial cds
ACCESSION EF449777
VERSION EF449777.1 GI:134023155
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 971)
Show all sequences for reference 1
AUTHORS von Wyl,V., Yerly,S., Boni,J., Burgisser,P., Klimkait,T.,
Battegay,M., Furrer,H., Telenti,A., Hirschel,B., Vernazza,P.L.,
Bernasconi,E., Rickenbach,M., Perrin,L., Ledergerber,B. and
Gunthard,H.F.
CONSRTM for the Swiss HIV Cohort Study
TITLE Emergence of HIV-1 drug resistance in previously untreated patients
initiating combination antiretroviral treatment: a comparison of
different regimen types
JOURNAL Arch. Intern. Med. 167 (16), 1782-1790 (2007)
PUBMED 17846398
REFERENCE 2 (bases 1 to 971)
Show all sequences for reference 2
AUTHORS von Wyl,V., Yerly,S., Boeni,J., Buergisser,P., Klimkait,T.,
Battegay,M., Furrer,H., Telenti,A., Hirschel,B., Vernazza,P.L.,
Bernasconi,E., Rickenbach,M., Perrin,L., Ledergerber,B. and
Guenthard,H.F.
CONSRTM Swiss HIV Cohort Study
TITLE Direct Submission
JOURNAL Submitted (22-FEB-2007) Division of Infectious Diseases and
Hospital Epidemiology, University Hospital Zurich, Raemistrasse
100, Zurich CH-8091, Switzerland
FEATURES Location/Qualifiers
source 1..971
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="4815822"
/db_xref="taxon:11676"
/country="Switzerland"
/collection_date="2001"
gene <1..>971
/gene="pol"
CDS <1..>971
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABO45435.1"
/db_xref="GI:134023156"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMELPGRWKP
KXIGGIGGFIKVKQYDQIPIEICGHKAIGTVLVGPTPANIIGRNLLTQLGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILDPFRKQNPD
IVIYQYVDDLYVGSDLEIGQHRIKIEELRQHLLRWGFTTPDKKHQKEP"
BASE COUNT 373 a 158 c 204 g 228 t 8 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagacatgga gttgccaggg
121 aggtggaaac caaaawtgat agggggaatt ggaggtttta tcaaagtaaa acagtatgat
181 caaataccca tagaaatctg tgggcataaa gctataggta cagtattagt aggacctaca
241 cctgccaaca taattggaag aaatctgttg actcaacttg gttgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatwtg tacagaaatg
421 gaaaaggaag ggaagatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagattttag agaacttaat
541 aagagaactc aagacttttg ggaagttcaa ttaggaatac cacatcctgc agggttaaaa
601 aagaaaaaat cagtracagt actggatgtg ggtgatgcat atttctcagt tcccttagat
661 aaagacttca ggaagtatac tgcatttacc atacctagca taaacaatga gacaccaggg
721 attagatatc artacaatgt gctyccacag ggatggaaag gatcaccagc gatattccaa
781 tgcagtatga caaaaatctt agatcctttt agaaaacaaa atccagacat agttatctac
841 caatacgtgg atgatttgta tgtaggatct gatctrgaaa tagggcagca tagrataaag
901 atagaggaac tgagacagca tctkttgagg tgggggttta ctacaccaga caaaaaacat
961 cagaaagaac c
//
last modified: Tue May 31 10:56 2022