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LOCUS EF432709 895 bp RNA linear VRL 01-OCT-2007
DEFINITION HIV-1 isolate fj93 from China pol protein (pol) gene, partial cds
ACCESSION EF432709
VERSION EF432709.1 GI:151337669
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 895)
Show all sequences for reference 1
AUTHORS Liu,J., Yue,J., Wu,S. and Yan,Y.
TITLE Polymorphisms and drug resistance analysis of HIV-1 CRF01_AE
strains circulating in Fujian Province, China
JOURNAL Arch. Virol. 152 (10), 1799-1805 (2007)
PUBMED 17619115
REFERENCE 2 (bases 1 to 895)
Show all sequences for reference 2
AUTHORS Liu,J., Yue,J. and Yan,Y.
TITLE Direct Submission
JOURNAL Submitted (11-FEB-2007) Department of Clinical Laboratory, Shanghai
Pulmonary Hospital, NO.507 Zhengmin Road, Shanghai 200433, China
COMMENT drived from drug naive patient.
FEATURES Location/Qualifiers
source 1..895
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="fj93"
/isolation_source="drug naive patient"
/db_xref="taxon:11676"
/country="China: Fujian Province"
/note="subtype: CRF01_AE"
gene <1..>895
/gene="pol"
/note="HXB2 2253-3347"
CDS <1..>895
/gene="pol"
/note="protease and 5'' end of reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABS01267.1"
/db_xref="GI:151337670"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDINLPGKWKP
KMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPIS
PIDTVPVTLKPGMDGPKIKQWPLTEEKIKALTDICKEMEEEGKISRIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKSFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPE
MVIYQYMDDLYVGSDLEIGQHR"
BASE COUNT 350 a 136 c 188 g 221 t
ORIGIN
1 cctcaaatca ctctttggca acgacccctt gtcacaataa aaataggagg acagctaaaa
61 gaagctctat tagatacagg agcagatgat acagtattag aagatataaa tttgccagga
121 aaatggaaac caaaaatgat agggggaatt ggaggtttta ttaaggtaag gcaatatgat
181 cagatactta tagaaatttg tggaaaaaag gctataggta cagtgttagt aggacccacg
241 cctgtcaaca taattggacg aaatatgttg actcagcttg gttgtacttt aaatttccca
301 attagtccta ttgacactgt accagtaaca ttaaagccag gaatggatgg accaaagatt
361 aaacagtggc cattgacaga agaaaaaata aaagcattaa cagacatttg taaagagatg
421 gaagaggaag gaaaaatctc aagaatcggg cctgaaaatc catacaatac tccagtattt
481 gctataaaga aaaaggacag caccaaatgg aggaaattag tagatttcag agagcttaat
541 aaaagaactc aggatttttg ggaagttcaa ttaggaatac cccatccggc aggtttaaaa
601 aagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcctttagat
661 aaaagtttta gaaagtatac tgcattcacc atacctagta caaataatga gacaccagga
721 atcagatatc agtacaatgt gctgccacag gggtggaaag gatcaccagc aatatttcag
781 agtagcatga caaaaatttt agagcccttt agaataaaaa atccagaaat ggttatttat
841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca cagaa
//
last modified: Tue May 31 10:56 2022