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LOCUS	    EF432709		     895 bp    RNA     linear	VRL 01-OCT-2007
DEFINITION  HIV-1 isolate fj93 from China pol protein (pol) gene, partial cds
ACCESSION   EF432709
VERSION     EF432709.1 GI:151337669
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 895)
            Show all sequences for reference 1
  AUTHORS   Liu,J., Yue,J., Wu,S. and Yan,Y.
  TITLE     Polymorphisms and drug resistance analysis of HIV-1 CRF01_AE
	    strains circulating in Fujian Province, China
  JOURNAL   Arch. Virol. 152 (10), 1799-1805 (2007)
  PUBMED    17619115
REFERENCE   2 (bases 1 to 895)
            Show all sequences for reference 2
  AUTHORS   Liu,J., Yue,J. and Yan,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-FEB-2007) Department of Clinical Laboratory, Shanghai
	    Pulmonary Hospital, NO.507 Zhengmin Road, Shanghai 200433, China
COMMENT     drived from drug naive patient.
FEATURES             Location/Qualifiers
     source	     1..895
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="fj93"
		     /isolation_source="drug naive patient"
		     /db_xref="taxon:11676"
		     /country="China: Fujian Province"
		     /note="subtype: CRF01_AE"
     gene	     <1..>895
		     /gene="pol"
		     /note="HXB2 2253-3347"
     CDS	     <1..>895
		     /gene="pol"
		     /note="protease and 5'' end of reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABS01267.1"
		     /db_xref="GI:151337670"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDINLPGKWKP
		     KMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPIS
		     PIDTVPVTLKPGMDGPKIKQWPLTEEKIKALTDICKEMEEEGKISRIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKSFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPE
		     MVIYQYMDDLYVGSDLEIGQHR"
BASE COUNT	350 a	 136 c	  188 g    221 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccctt gtcacaataa aaataggagg acagctaaaa 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagatataaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta ttaaggtaag gcaatatgat 
     181 cagatactta tagaaatttg tggaaaaaag gctataggta cagtgttagt aggacccacg 
     241 cctgtcaaca taattggacg aaatatgttg actcagcttg gttgtacttt aaatttccca 
     301 attagtccta ttgacactgt accagtaaca ttaaagccag gaatggatgg accaaagatt 
     361 aaacagtggc cattgacaga agaaaaaata aaagcattaa cagacatttg taaagagatg 
     421 gaagaggaag gaaaaatctc aagaatcggg cctgaaaatc catacaatac tccagtattt 
     481 gctataaaga aaaaggacag caccaaatgg aggaaattag tagatttcag agagcttaat 
     541 aaaagaactc aggatttttg ggaagttcaa ttaggaatac cccatccggc aggtttaaaa 
     601 aagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcctttagat 
     661 aaaagtttta gaaagtatac tgcattcacc atacctagta caaataatga gacaccagga 
     721 atcagatatc agtacaatgt gctgccacag gggtggaaag gatcaccagc aatatttcag 
     781 agtagcatga caaaaatttt agagcccttt agaataaaaa atccagaaat ggttatttat 
     841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca cagaa
//
last modified: Tue May 31 10:56 2022


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