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LOCUS EF193908 1129 bp RNA linear VRL 02-MAY-2007
DEFINITION HIV-1 isolate CH21 from Chile pol protein (pol) gene, partial cds
ACCESSION EF193908
VERSION EF193908.1 GI:145982425
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1129)
Show all sequences for reference 1
AUTHORS Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P., de
Parga,E.V., Yung,V., Thomson,M.M. and Najera,R.
TITLE Antiretroviral drug resistance and phylogenetic diversity of HIV-1
in Chile
JOURNAL J. Med. Virol. 79 (6), 647-656 (2007)
PUBMED 17457921
REFERENCE 2 (bases 1 to 1129)
Show all sequences for reference 2
AUTHORS Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P.,
Vazquez de Parga,E., Yung,V., Thomson,M. and Najera,R.
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2006) Patogenia Viral, Instituto de Salud Carlos
III, Ctra Majadahonda a Pozuelo, km 2, Majadahonda, Madrid 28220,
Spain
FEATURES Location/Qualifiers
source 1..1129
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="CH21"
/db_xref="taxon:11676"
/country="Chile"
gene <1..>1129
/gene="pol"
CDS <1..>1129
/gene="pol"
/note="PR-RT"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABQ00987.1"
/db_xref="GI:145982426"
/translation="PQITLWQRPLVTIKIGGHIKEALLDTGADDTVLEEMNLSGRWKP
KMIGGIGGFIKVRQYDQVPIEICGHKVIGTVLVGPTPVNIIGRNLLTQLGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFXKQNPD
IVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLSWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPILLPEKDSWTVNDIQKLVGKLNWASQIYAGIKXK"
BASE COUNT 433 a 184 c 239 g 271 t 2 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg gcacataaag
61 gaagctctat tagacacagg agcagatgat acagtattag aagaaatgaa tttgtcagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 caggtaccca tagaaatctg tggacataaa gttataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagcttg gttgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagagatg
421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gctataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa
601 aagaaaaaat cagtaacagt gctggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaggacttca gaaagtatac tgcattcacc atacctagta taaacaatga gacaccaggg
721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa
781 tgtagcatga caaaaatctt agagcctttt araaaacaga atccagacat agttatctat
841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagagcaaaa
901 atagaggaac tgagacaaca cctgttgagt tgggggttca ccacaccaga caaaaaacat
961 cagaaagaac ctccatttct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctatat tactgccaga aaaagatagc tggactgtca atgacataca gaagttagtg
1081 ggaaaactga attgggcaag tcagatttat gcaggaatta agrtaaagc
//
last modified: Tue May 31 10:56 2022