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LOCUS	    EF193908		    1129 bp    RNA     linear	VRL 02-MAY-2007
DEFINITION  HIV-1 isolate CH21 from Chile pol protein (pol) gene, partial cds
ACCESSION   EF193908
VERSION     EF193908.1 GI:145982425
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1129)
            Show all sequences for reference 1
  AUTHORS   Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P., de
	    Parga,E.V., Yung,V., Thomson,M.M. and Najera,R.
  TITLE     Antiretroviral drug resistance and phylogenetic diversity of HIV-1
	    in Chile
  JOURNAL   J. Med. Virol. 79 (6), 647-656 (2007)
  PUBMED    17457921
REFERENCE   2 (bases 1 to 1129)
            Show all sequences for reference 2
  AUTHORS   Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P.,
	    Vazquez de Parga,E., Yung,V., Thomson,M. and Najera,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2006) Patogenia Viral, Instituto de Salud Carlos
	    III, Ctra Majadahonda a Pozuelo, km 2, Majadahonda, Madrid 28220,
	    Spain
FEATURES             Location/Qualifiers
     source	     1..1129
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="CH21"
		     /db_xref="taxon:11676"
		     /country="Chile"
     gene	     <1..>1129
		     /gene="pol"
     CDS	     <1..>1129
		     /gene="pol"
		     /note="PR-RT"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABQ00987.1"
		     /db_xref="GI:145982426"
		     /translation="PQITLWQRPLVTIKIGGHIKEALLDTGADDTVLEEMNLSGRWKP
		     KMIGGIGGFIKVRQYDQVPIEICGHKVIGTVLVGPTPVNIIGRNLLTQLGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFXKQNPD
		     IVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLSWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPILLPEKDSWTVNDIQKLVGKLNWASQIYAGIKXK"
BASE COUNT	433 a	 184 c	  239 g    271 t      2 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg gcacataaag 
      61 gaagctctat tagacacagg agcagatgat acagtattag aagaaatgaa tttgtcagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 caggtaccca tagaaatctg tggacataaa gttataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagcttg gttgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagagatg 
     421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gctataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa 
     601 aagaaaaaat cagtaacagt gctggatgtg ggtgatgcat atttttcagt tcccttagat 
     661 aaggacttca gaaagtatac tgcattcacc atacctagta taaacaatga gacaccaggg 
     721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa 
     781 tgtagcatga caaaaatctt agagcctttt araaaacaga atccagacat agttatctat 
     841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagagcaaaa 
     901 atagaggaac tgagacaaca cctgttgagt tgggggttca ccacaccaga caaaaaacat 
     961 cagaaagaac ctccatttct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 cagcctatat tactgccaga aaaagatagc tggactgtca atgacataca gaagttagtg 
    1081 ggaaaactga attgggcaag tcagatttat gcaggaatta agrtaaagc
//
last modified: Tue May 31 10:56 2022


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