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LOCUS EF193891 1129 bp RNA linear VRL 02-MAY-2007
DEFINITION HIV-1 isolate CH8 from Chile pol protein (pol) gene, partial cds
ACCESSION EF193891
VERSION EF193891.1 GI:145982391
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1129)
Show all sequences for reference 1
AUTHORS Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P., de
Parga,E.V., Yung,V., Thomson,M.M. and Najera,R.
TITLE Antiretroviral drug resistance and phylogenetic diversity of HIV-1
in Chile
JOURNAL J. Med. Virol. 79 (6), 647-656 (2007)
PUBMED 17457921
REFERENCE 2 (bases 1 to 1129)
Show all sequences for reference 2
AUTHORS Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P.,
Vazquez de Parga,E., Yung,V., Thomson,M. and Najera,R.
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2006) Patogenia Viral, Instituto de Salud Carlos
III, Ctra Majadahonda a Pozuelo, km 2, Majadahonda, Madrid 28220,
Spain
FEATURES Location/Qualifiers
source 1..1129
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="CH8"
/db_xref="taxon:11676"
/country="Chile"
gene <1..>1129
/gene="pol"
CDS <1..>1129
/gene="pol"
/note="PR-RT"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABQ00970.1"
/db_xref="GI:145982392"
/translation="PQITLWQRPLVIIKVGGQIKEALLDTGADDTVLEDITLPGKWKP
KMIGGIGGFIKVKQYDDITIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVK"
BASE COUNT 443 a 179 c 240 g 267 t
ORIGIN
1 cctcaaatca ctctttggca acgacctcta gtcataataa aagtaggggg acagataaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagacataac tttgccagga
121 aaatggaaac caaaaatgat agggggaatt ggagggttta tcaaagtaaa acagtatgat
181 gacataacca tagaaatttg tggacacaag gctataggta cggtattagt aggacctaca
241 cctgtcaaca taattggaag aaatttgttg actcagattg gatgcacttt aaattttccc
301 atcagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagagatctg tacagaaatg
421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaagatag taccaaatgg aggaaattag tagatttcag agaacttaat
541 aaaagaactc aagatttttg ggaggttcaa ttaggaatac cgcatcctgc agggttaaaa
601 aagaaaaagt cagtaacagt actggatgtg ggggatgcat atttttcagt tccattagat
661 aaagaattca ggaagtacac tgcattcacc atacctagta taaacaatga gacaccaggg
721 attagatatc agtacaatgt ccttccacag ggatggaaag gatcaccagc aatatttcaa
781 agtagcatga taaaaatctt agagcctttt agaaaacaaa atccggacat agttatctat
841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaacaaaa
901 atagaggaac tgagacaaca tctgttgaga tggggattaa ccacaccaga caaaaaacat
961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctatag tactgccaga aaaggacagc tggactgtca atgacataca gaagttagtg
1081 ggaaaattaa attgggcaag tcagatttac ccagggatta aagtgaagc
//
last modified: Tue May 31 10:56 2022