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LOCUS EF066826 657 bp DNA linear VRL 07-MAY-2007
DEFINITION HIV-1 clone 4_v1_1A_1 from USA reverse transcriptase (pol) gene,
partial cds
ACCESSION EF066826
VERSION EF066826.1 GI:126035780
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 657)
Show all sequences for reference 1
AUTHORS Persaud,D., Palumbo,P., Ziemniak,C., Chen,J., Ray,S.C., Hughes,M.,
Havens,P., Purswani,M., Gaur,A.H. and Chadwick,E.G.
CONSRTM Pediatric AIDS Clinical Trials Group P1030 Team
TITLE Early Archiving and Predominance of Nonnucleoside Reverse
Transcriptase Inhibitor-Resistant HIV-1 among Recently Infected
Infants Born in the United States
JOURNAL J. Infect. Dis. 195 (10), 1402-1410 (2007)
PUBMED 17436219
REFERENCE 2 (bases 1 to 657)
Show all sequences for reference 2
AUTHORS Persaud,D., Palumbo,P., Ziemniak,C., Chen,J., Ray,S.C., Havens,P.,
Purswani,M., Gaur,A.H. and Chadwick,E.G.
CONSRTM Pediatric AIDS Clinical Trials Group P1030 Team
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2006) Pediatrics, Johns Hopkins University School
of Medicine, 600 N. Wolfe Street, Baltimore, MD 21287, USA
FEATURES Location/Qualifiers
source 1..657
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="4"
/isolation_source="resting CD4 cells, time point 1"
/db_xref="taxon:11676"
/clone="4_v1_1A_1"
/country="USA"
/note="PACTG trial 1030"
gene <1..>657
/gene="pol"
CDS <1..>657
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="ABN71752.1"
/db_xref="GI:126035781"
/translation="GPRVKQWPLTGEKIKALTEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDENFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPD
LVIYQYMDDLYVASDLEIGQHRAKIEELRQHLLKWGLTTPDKKHQKEPPFLWMGYELH
P"
BASE COUNT 264 a 109 c 131 g 153 t
ORIGIN
1 ggcccaagag ttaagcaatg gccattgaca ggagaaaaaa taaaagcatt aacagagatt
61 tgtacagaaa tggaaaagga aggaaaaatt tcaaaaattg ggcctgaaaa cccatacaat
121 actccagtat ttgccataaa gaaaaaagac agtactaaat ggagaaaatt agtagatttc
181 agagaactta ataaaagaac tcaagacttc tgggaagtac aattaggaat accacatcct
241 gcagggctga agaagaaaaa atcagtaaca gtgctagatg tgggtgatgc atatttttca
301 gttcccttag atgaaaactt caggaaatat actgcattta ccatacctag tataaacaat
361 gagacaccag gggtgagata tcagtacaat gtgcttccac agggatggaa aggatcacca
421 gcaatattcc aaagtagcat gacaaaaatc ttagagcctt ttaaaaaaca aaatccagac
481 ttagttatct atcaatacat ggatgatttg tatgtagcat ctgatttaga aataggacag
541 catagagcaa aaatagagga attaagacaa catctgttga agtggggact taccacacca
601 gacaaaaagc atcagaagga acctccattt ctttggatgg gttatgaact ccatcct
//
last modified: Tue May 31 10:56 2022