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LOCUS EF066749 657 bp DNA linear VRL 07-MAY-2007
DEFINITION HIV-1 clone 1_v1_1A_4 from USA nonfunctional reverse transcripase
(pol) gene, partial sequence
ACCESSION EF066749
VERSION EF066749.1 GI:126035691
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 657)
Show all sequences for reference 1
AUTHORS Persaud,D., Palumbo,P., Ziemniak,C., Chen,J., Ray,S.C., Hughes,M.,
Havens,P., Purswani,M., Gaur,A.H. and Chadwick,E.G.
CONSRTM Pediatric AIDS Clinical Trials Group P1030 Team
TITLE Early Archiving and Predominance of Nonnucleoside Reverse
Transcriptase Inhibitor-Resistant HIV-1 among Recently Infected
Infants Born in the United States
JOURNAL J. Infect. Dis. 195 (10), 1402-1410 (2007)
PUBMED 17436219
REFERENCE 2 (bases 1 to 657)
Show all sequences for reference 2
AUTHORS Persaud,D., Palumbo,P., Ziemniak,C., Chen,J., Ray,S.C., Havens,P.,
Purswani,M., Gaur,A.H. and Chadwick,E.G.
CONSRTM Pediatric AIDS Clinical Trials Group P1030 Team
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2006) Pediatrics, Johns Hopkins University School
of Medicine, 600 N. Wolfe Street, Baltimore, MD 21287, USA
FEATURES Location/Qualifiers
source 1..657
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="1"
/isolation_source="resting CD4 cells, time point 1"
/db_xref="taxon:11676"
/clone="1_v1_1A_4"
/country="USA"
/note="PACTG trial 1030"
gene <1..>657
/gene="pol"
misc_feature <1..>657
/gene="pol"
/note="nonfunctional reverse transcripase due to internal
stop codon"
BASE COUNT 274 a 112 c 122 g 149 t
ORIGIN
1 ggcccaaaag ttaaacaatg gccattgaca gaagaaaaaa taaaagcact aatagaaatt
61 tgttcagaaa tgaaaaagga aggaaaaatt tcaaaaattg ggcctgaaaa tccatacaat
121 actccagtat ttgccataaa gaaaaaagac agtactaaat gaaaaaaatt agtagatttt
181 agggaactta ataagagaac ccaagacttc tgagaagttc aattaggaat accacatcct
241 gcagggttaa aaaacaaaaa atcagtaaca gtactggatg tgggtgatgc atatttttca
301 gttcccttag ataaagactt caggaagtat acagcattta ccatacctag tataaacaat
361 gagacaccag gaactagata tcagtacaat gtgctcccac agggatggaa agaatcacca
421 gcaatattcc aaagtagcat gacaaaaatc ttagagcctt ttagaaaaaa gaacccagac
481 atagtcatct atcaatacgt ggatgatttg tatataggat ctaacttaga gataggacag
541 catagaacaa aaatagagga actgagagga catctcttaa agtgggggtt taccacacca
601 gacaaaaaac atcagaaaga acctccattc ctttggatgg ggtatgaact ccatcct
//
last modified: Tue May 31 10:56 2022