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LOCUS DQ784917 866 bp RNA linear VRL 25-JAN-2007
DEFINITION Simian immunodeficiency virus isolate 1/52NC20-3 envelope
glycoprotein (env) gene, partial cds
ACCESSION DQ784917
VERSION DQ784917.1 GI:111146310
KEYWORDS .
SOURCE Simian immunodeficiency virus
ORGANISM Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 866)
Show all sequences for reference 1
AUTHORS Rivera-Amill,V., Noel,R.J. Jr.., Orsini,S., Tirado,G., Garcia,J.M.,
Buch,S. and Kumar,A.
TITLE Variable region 4 of SIV envelope correlates with rapid disease
progression in morphine-exposed macaques infected with SIV/SHIV
JOURNAL Virology 358 (2), 373-383 (2007)
PUBMED 17011009
REFERENCE 2 (bases 1 to 866)
Show all sequences for reference 2
AUTHORS Rivera-Amill,V. and Kumar,A.
TITLE Direct Submission
JOURNAL Submitted (16-JUN-2006) Microbiology, Ponce School of Medicine,
P.O. Box 7004, Ponce, PR 00716, USA
FEATURES Location/Qualifiers
source 1..866
/organism="Simian immunodeficiency virus"
/mol_type="genomic RNA"
/isolate="1/52NC20-3"
/db_xref="taxon:11723"
/country="Puerto Rico"
gene <1..>866
/gene="env"
CDS <1..>866
/gene="env"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABH07180.1"
/db_xref="GI:111146311"
/translation="LLRCNDTNYSGSMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAE
NRTYIYWHGRDNRTIISLNKYYNLTIKCRRPGNKTVLPVTIMSGLVFHSQRINDRPRQ
AWCWFGGEWKDAIKEVKQTIVKHPRYTGTNNTDKINLTAPRGGGPEVTFMWTNCRGEF
LYCKMNWFLNWVEDRNTANQKPKEQHKKNYVPCHIRQIINTWHKVGKNVYLPPRVGDL
TCNSTVTSLIASINWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGLAPTDVKRY
TTGGTSRNKRGV"
BASE COUNT 300 a 146 c 202 g 218 t
ORIGIN
1 ctttgcttag atgtaatgac acaaattatt caggctctat gcctaaatgt tctaaggtgg
61 tggtctcttc atgcacaagg atgatggaga cacagacttc tacttggttt ggctttaatg
121 gaactagagc agaaaataga acttatattt actggcatgg tagggataat aggactataa
181 ttagtttaaa taagtattat aatctaacaa taaaatgtag aaggccagga aataagacag
241 ttttaccagt caccattatg tctggattgg ttttccactc acaacgaatc aatgataggc
301 caaggcaggc atggtgttgg tttggaggag aatggaagga tgcgataaaa gaggtgaagc
361 agaccattgt caaacatccc aggtatactg gaactaacaa tactgataaa atcaatttga
421 cggctcctag aggaggaggt ccggaagtta ccttcatgtg gacaaattgc agaggagagt
481 tcctctactg taaaatgaac tggtttctaa attgggtaga agataggaat acagctaacc
541 agaagccaaa ggaacagcat aaaaagaatt acgtgccatg tcatatcaga caaataatca
601 acacttggca taaagtaggc aaaaatgttt atttgcctcc aagagtggga gacctcacgt
661 gtaactccac agtgaccagt ctcatagcaa gcataaattg gattgatgga aaccaaacta
721 atatcaccat gagtgcagag gtggcagaac tgtatcgatt ggaattggga gattataaat
781 tagtagagat cactccaatt ggcttggccc ccacagatgt gaagaggtac actactggtg
841 gcacctcaag aaataaaaga ggggtc
//
last modified: Tue May 31 10:56 2022