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LOCUS	    DQ784917		     866 bp    RNA     linear	VRL 25-JAN-2007
DEFINITION  Simian immunodeficiency virus isolate 1/52NC20-3 envelope
	    glycoprotein (env) gene, partial cds
ACCESSION   DQ784917
VERSION     DQ784917.1 GI:111146310
KEYWORDS    .
SOURCE	    Simian immunodeficiency virus
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 866)
            Show all sequences for reference 1
  AUTHORS   Rivera-Amill,V., Noel,R.J. Jr.., Orsini,S., Tirado,G., Garcia,J.M.,
	    Buch,S. and Kumar,A.
  TITLE     Variable region 4 of SIV envelope correlates with rapid disease
	    progression in morphine-exposed macaques infected with SIV/SHIV
  JOURNAL   Virology 358 (2), 373-383 (2007)
  PUBMED    17011009
REFERENCE   2 (bases 1 to 866)
            Show all sequences for reference 2
  AUTHORS   Rivera-Amill,V. and Kumar,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUN-2006) Microbiology, Ponce School of Medicine,
	    P.O. Box 7004, Ponce, PR 00716, USA
FEATURES             Location/Qualifiers
     source	     1..866
		     /organism="Simian immunodeficiency virus"
		     /mol_type="genomic RNA"
		     /isolate="1/52NC20-3"
		     /db_xref="taxon:11723"
		     /country="Puerto Rico"
     gene	     <1..>866
		     /gene="env"
     CDS	     <1..>866
		     /gene="env"
		     /codon_start="3"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ABH07180.1"
		     /db_xref="GI:111146311"
		     /translation="LLRCNDTNYSGSMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAE
		     NRTYIYWHGRDNRTIISLNKYYNLTIKCRRPGNKTVLPVTIMSGLVFHSQRINDRPRQ
		     AWCWFGGEWKDAIKEVKQTIVKHPRYTGTNNTDKINLTAPRGGGPEVTFMWTNCRGEF
		     LYCKMNWFLNWVEDRNTANQKPKEQHKKNYVPCHIRQIINTWHKVGKNVYLPPRVGDL
		     TCNSTVTSLIASINWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGLAPTDVKRY
		     TTGGTSRNKRGV"
BASE COUNT	300 a	 146 c	  202 g    218 t
ORIGIN
       1 ctttgcttag atgtaatgac acaaattatt caggctctat gcctaaatgt tctaaggtgg 
      61 tggtctcttc atgcacaagg atgatggaga cacagacttc tacttggttt ggctttaatg 
     121 gaactagagc agaaaataga acttatattt actggcatgg tagggataat aggactataa 
     181 ttagtttaaa taagtattat aatctaacaa taaaatgtag aaggccagga aataagacag 
     241 ttttaccagt caccattatg tctggattgg ttttccactc acaacgaatc aatgataggc 
     301 caaggcaggc atggtgttgg tttggaggag aatggaagga tgcgataaaa gaggtgaagc 
     361 agaccattgt caaacatccc aggtatactg gaactaacaa tactgataaa atcaatttga 
     421 cggctcctag aggaggaggt ccggaagtta ccttcatgtg gacaaattgc agaggagagt 
     481 tcctctactg taaaatgaac tggtttctaa attgggtaga agataggaat acagctaacc 
     541 agaagccaaa ggaacagcat aaaaagaatt acgtgccatg tcatatcaga caaataatca 
     601 acacttggca taaagtaggc aaaaatgttt atttgcctcc aagagtggga gacctcacgt 
     661 gtaactccac agtgaccagt ctcatagcaa gcataaattg gattgatgga aaccaaacta 
     721 atatcaccat gagtgcagag gtggcagaac tgtatcgatt ggaattggga gattataaat 
     781 tagtagagat cactccaatt ggcttggccc ccacagatgt gaagaggtac actactggtg 
     841 gcacctcaag aaataaaaga ggggtc
//
last modified: Tue May 31 10:56 2022


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