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LOCUS	    DQ784875		     865 bp    RNA     linear	VRL 25-JAN-2007
DEFINITION  Simian immunodeficiency virus isolate 1/28QC12-9 nonfunctional
	    envelope glycoprotein (env) gene, partial sequence
ACCESSION   DQ784875
VERSION     DQ784875.1 GI:111146233
KEYWORDS    .
SOURCE	    Simian immunodeficiency virus
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 865)
            Show all sequences for reference 1
  AUTHORS   Rivera-Amill,V., Noel,R.J. Jr.., Orsini,S., Tirado,G., Garcia,J.M.,
	    Buch,S. and Kumar,A.
  TITLE     Variable region 4 of SIV envelope correlates with rapid disease
	    progression in morphine-exposed macaques infected with SIV/SHIV
  JOURNAL   Virology 358 (2), 373-383 (2007)
  PUBMED    17011009
REFERENCE   2 (bases 1 to 865)
            Show all sequences for reference 2
  AUTHORS   Rivera-Amill,V. and Kumar,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUN-2006) Microbiology, Ponce School of Medicine,
	    P.O. Box 7004, Ponce, PR 00716, USA
FEATURES             Location/Qualifiers
     source	     1..865
		     /organism="Simian immunodeficiency virus"
		     /mol_type="genomic RNA"
		     /isolate="1/28QC12-9"
		     /db_xref="taxon:11723"
		     /country="Puerto Rico"
     gene	     <1..>865
		     /gene="env"
     misc_feature    <1..>865
		     /gene="env"
		     /note="nonfunctional envelope glycoprotein due to
		     mutation"
BASE COUNT	305 a	 145 c	  197 g    218 t
ORIGIN
       1 ctttgcttag atgtaatgac acaaattatt caggctttat gcctaaatgt tctaaggtgg 
      61 tggtctcttc atgcacaagg atgatggaga cacagacttc tacttggttt ggctttaatg 
     121 gaactagagc agaaaataga acttatattt actggcatgg tagggataat aggactataa 
     181 ttagtttaaa taagtattat aatctaacaa taaaatgtag aagaccagga aataagacag 
     241 ttttaccagt caccattatg tctggattgg ttttccactc acaacgaatc aatgataggc 
     301 caagacaggc atggtgttgg tttggaggaa aatggaagga tgcaataaaa gaggtgaagc 
     361 agaccattgt caaacatccc aggtacactg gaactaacaa tactgataaa atcaatttga 
     421 cggctcctag agggggagat ccggaagtta ccttcatgtg gacaaattgc agaggagagt 
     481 tcctctactg taaaatgaat tggtttctaa attaggtaga agataagaat acagctaacc 
     541 agaagccaaa ggaacagcat aaaaggaatt acgtgccatg tcatatcaga caaataatca 
     601 acacttggca taaagtaggc aaaaatgttt atttgcctcc aagagaggga gacctcacgt 
     661 gtaactccac agtgaccagt ctcatagcaa acataaattg gattgatgga aaccaaacta 
     721 atatcaccat gagtgcagag gtggcagaac tgtatcgatt ggaattggga gattataaat 
     781 tagtagagat cactccaatt ggcttggccc ccacagatgt gaagaggtgc actactggtg 
     841 gcacctcaag aataaaagag gggtc
//
last modified: Tue May 31 10:56 2022


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