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LOCUS DQ391301 373 bp DNA linear VRL 16-JUN-2006
DEFINITION HIV-1 clone re3 from USA envelope glycoprotein (env) gene, partial
cds
ACCESSION DQ391301
VERSION DQ391301.1 GI:90191733
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 373)
Show all sequences for reference 1
AUTHORS Bailey,J.R., Sedaghat,A.R., Kieffer,T., Brennan,T., Lee,P.K.,
Wind-Rotolo,M., Haggerty,C.M., Kamireddi,A.R., Liu,Y., Lee,J.,
Persaud,D., Gallant,J.E., Cofrancesco,J. Jr.., Quinn,T.C.,
Wilke,C.O., Ray,S.C., Siliciano,J.D., Nettles,R.E. and
Siliciano,R.F.
TITLE Residual Human Immunodeficiency Virus Type 1 Viremia in Some
Patients on Antiretroviral Therapy Is Dominated by a Small Number
of Invariant Clones Rarely Found in Circulating CD4+ T Cells
JOURNAL J. Virol. 80 (13), 6441-6457 (2006)
PUBMED 16775332
REFERENCE 2 (bases 1 to 373)
Show all sequences for reference 2
AUTHORS Bailey,J.R., Sedaghat,A.R., Kieffer,T., Brennan,T., Kwon,P.,
Wind-Rotolo,M., Haggerty,C.M., Kamireddi,A.R., Liu,Y., Li,J.,
Persaud,D., Gallant,J.E., Cofrancesco,J. Jr.., Quinn,T.C.,
Wilke,C.O., Ray,S.C., Siliciano,J.D. and Nettles,R.E.
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2006) Medicine, Johns Hopkins University School
of Medicine, 733 N Broadway, Baltimore, MD 21205, USA
REFERENCE 3
Show all sequences for reference 3
AUTHORS Wang,Z., Gurule,E.E., Brennan,T.P., Gerold,J.M., Kwon,K.J.,
Hosmane,N.N., Kumar,M.R., Beg,S.A., Capoferri,A.A., Ray,S.C.,
Ho,Y.-C., Hill,A.L., Siliciano,J.D. and Siliciano,R.F.
TITLE Expanded cellular clones carrying replication-competent HIV-1
persist, wax, and wane.
JOURNAL Proc. Natl. Acad. Sci. U. S. A.. 115(11); E2575-E2584 (2018)
PUBMED 29483265
FEATURES Location/Qualifiers
source 1..373
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolation_source="subject 154 resting CD4 cells, time
point 38"
/db_xref="taxon:11676"
/clone="re3"
/country="USA"
gene <1..>373
/gene="env"
CDS <1..>373
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABD91596.1"
/db_xref="GI:90191734"
/translation="LNETVIINCTRPNNNTRKSINMGPGRAFFTTGEIIGDIRKAHCN
LTRANWTETLKRIAIKLGEQFNKTFNQSSGGDPEIAMISFNCGGEFFYCNSTQLFNST
IILPCRIKQIINMWQGVGKAMY"
BASE COUNT 160 a 52 c 69 g 92 t
ORIGIN
1 ctgaatgaaa ctgtaataat aaattgtaca agacccaaca acaatacaag aaaaagtata
61 aatatgggac caggcagagc attttttaca acaggagaaa taataggaga tataagaaaa
121 gcacattgta acctgactag agcaaattgg actgagactt taaaaagaat agccataaaa
181 ttaggagaac aatttaataa aacatttaac caatcctcag gaggggaccc agaaattgca
241 atgatcagtt ttaattgtgg aggggaattt ttctattgta attcaacaca actgtttaat
301 agtactatca tactcccatg cagaataaaa caaattataa atatgtggca gggagtagga
361 aaagcaatgt atg
//
last modified: Tue May 31 10:56 2022