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LOCUS DQ375332 836 bp RNA linear VRL 29-MAY-2007
DEFINITION HIV-1 isolate J11467 from Saudi Arabia gag protein (gag) gene,
partial cds
ACCESSION DQ375332
VERSION DQ375332.1 GI:87242113
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 836)
Show all sequences for reference 1
AUTHORS Badreddine,S., Smith,K., van Zyl,H., Bodelle,P., Yamaguchi,J.,
Swanson,P., Devare,S.G. and Brennan,C.A.
TITLE Identification and characterization of HIV type 1 subtypes present
in the Kingdom of Saudi Arabia: high level of genetic diversity
found
JOURNAL AIDS Res. Hum. Retroviruses 23 (5), 667-674 (2007)
PUBMED 17530991
REFERENCE 2 (bases 1 to 836)
Show all sequences for reference 2
AUTHORS Badreddine,S., Smith,K., Zyl,H., Bodelle,P., Yamaguchi,J.,
Devare,S. and Brennan,C.
TITLE Direct Submission
JOURNAL Submitted (24-JAN-2006) 09NG, Abbott Laboratories, 100 Abbott Park
Rd., Abbott Park, IL 60064-6015, USA
FEATURES Location/Qualifiers
source 1..836
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="J11467"
/isolation_source="plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Saudi Arabia"
gene <1..>836
/gene="gag"
CDS <1..>836
/gene="gag"
/codon_start="2"
/transl_table="1"
/product="gag protein"
/protein_id="ABD33615.1"
/db_xref="GI:87242114"
/translation="ALDKIEEEQNKSKKKAQQAAADTXKSSQVSQNYPIVQNLQGQMI
HQALSPRTLNAWVKVVEEKAFSPEVIPMFXALSEGATPGDLNTMLNTIGGHQAAMQML
KETINEEAAEWDRLHPVQAGPVAPGQMREPRGSDIAGTTSTLQEQIGWMTSNPPIPVG
EIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQATQEVKNWM
TETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPSHKARVLAEAMSQATNNTA
AI"
BASE COUNT 324 a 165 c 193 g 151 t 3 other
ORIGIN
1 agctttagat aagatagagg aagaacaaaa caaaagtaag aaaaaagcac agcaagcagc
61 agctgacaca graaaaagca gccaggtcag ccaaaattac cccatagtgc agaacttaca
121 ggggcaaatg atacaccaag ctttatcacc tagaaccttg aatgcatggg taaaagtagt
181 agaggaaaag gctttcagcc cagaagtaat acccatgttt wcagcattat cagaaggagc
241 cacccccgga gatttaaaca ccatgctaaa cacaataggg ggacatcaag cagccatgca
301 aatgttaaaa gagaccatca atgaggaagc tgcagaatgg gacaggctac atccagtaca
361 agcagggcct gttgcaccag gccagatgag agaaccaagg gggagtgata ttgcaggaac
421 cactagtacc cttcaggaac aaataggatg gatgacaagc aatccaccta tcccagtagg
481 agaaatctat aaaagatgga taatcttggg attaaataaa atagtaagaa tgtatagycc
541 tgtcagcatt ttggatataa gacaaggacc aaaagaaccc tttagagact atgtagaccg
601 gttctataaa actctaagag ccgagcaagc tacacaggaa gtaaaaaatt ggatgacaga
661 aaccttgttg gtccaaaatg caaacccaga ttgtaaaact atcttaaagg cattagggcc
721 agcggctaca ttagaagaaa tgatgacagc atgtcaggga gtgggaggac ccagccataa
781 agcaagagtt ttggctgagg caatgagcca agcaacaaac aacactgctg caataa
//
last modified: Tue May 31 10:56 2022