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LOCUS DQ375290 815 bp RNA linear VRL 29-MAY-2007
DEFINITION HIV-1 isolate J11214 from Saudi Arabia gag protein (gag) gene,
partial cds
ACCESSION DQ375290
VERSION DQ375290.1 GI:87242029
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 815)
Show all sequences for reference 1
AUTHORS Badreddine,S., Smith,K., van Zyl,H., Bodelle,P., Yamaguchi,J.,
Swanson,P., Devare,S.G. and Brennan,C.A.
TITLE Identification and characterization of HIV type 1 subtypes present
in the Kingdom of Saudi Arabia: high level of genetic diversity
found
JOURNAL AIDS Res. Hum. Retroviruses 23 (5), 667-674 (2007)
PUBMED 17530991
REFERENCE 2 (bases 1 to 815)
Show all sequences for reference 2
AUTHORS Badreddine,S., Smith,K., Zyl,H., Bodelle,P., Yamaguchi,J.,
Devare,S. and Brennan,C.
TITLE Direct Submission
JOURNAL Submitted (24-JAN-2006) 09NG, Abbott Laboratories, 100 Abbott Park
Rd., Abbott Park, IL 60064-6015, USA
FEATURES Location/Qualifiers
source 1..815
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="J11214"
/isolation_source="plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Saudi Arabia"
gene <1..>815
/gene="gag"
CDS <1..>815
/gene="gag"
/codon_start="2"
/transl_table="1"
/product="gag protein"
/protein_id="ABD33573.1"
/db_xref="GI:87242030"
/translation="ALDKIEEEQNKCQQKLEAADQGKVSQNYPIVQNLQGQMVHQHMS
PRTLNAWVKVIEEKGFNPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTIN
EEAAEWDRLHPVHAGPNPPGQMREPRGSDIAGVTSTLQEQIAWMTSNPPVPVGDIYKK
WIILGLNKIVRMYSPVCILDIKQGPKEPFRDYVDRFFKTLRAEQASQDVKNWMTDTLL
VQNANPDCKTILRALGPGASLEEMMTACQGVGGPSHKARVLAEAMSQANNANV"
BASE COUNT 308 a 152 c 191 g 164 t
ORIGIN
1 agcattagac aagatagagg aagaacaaaa caaatgtcag cagaaattag aagcagctga
61 ccaaggaaaa gtcagtcaaa attatcctat agtacagaat ctccaagggc aaatggtaca
121 ccagcacatg tcacctagaa ctttgaatgc atgggtaaaa gtaatagagg agaagggttt
181 caacccagaa gtaataccca tgtttacagc attatcagaa ggagccaccc cacaagattt
241 aaacaccatg ttaaatacag tggggggaca tcaagcagct atgcaaatgt taaaagatac
301 catcaatgag gaggctgcag aatgggacag gttacatcca gtgcatgcag ggcctaatcc
361 accaggccaa atgagagaac caaggggaag tgacatagca ggagttacta gtacccttca
421 ggaacaaata gcatggatga caagtaaccc acctgttcca gtaggagaca tctataaaaa
481 atggataatt ctggggttaa ataaaatagt aagaatgtat agccctgtct gcattttgga
541 cataaaacaa gggccaaagg aaccctttag agactatgta gacaggttct ttaaaacctt
601 aagagctgaa caagcttcac aagatgtgaa aaattggatg acagacacct tgttggtcca
661 aaatgcgaac ccagattgta agaccatttt aagagcatta gggccagggg cttcattaga
721 agaaatgatg acagcatgtc aaggagtggg aggacctagc cacaaagcta gagtgttggc
781 tgaggcaatg agccaagcaa acaatgcaaa cgtaa
//
last modified: Tue May 31 10:56 2022