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LOCUS DQ375271 898 bp RNA linear VRL 29-MAY-2007
DEFINITION HIV-1 isolate J11455 from Saudi Arabia pol protein (pol) gene,
partial cds
ACCESSION DQ375271
VERSION DQ375271.1 GI:87242167
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 898)
Show all sequences for reference 1
AUTHORS Badreddine,S., Smith,K., van Zyl,H., Bodelle,P., Yamaguchi,J.,
Swanson,P., Devare,S.G. and Brennan,C.A.
TITLE Identification and characterization of HIV type 1 subtypes present
in the Kingdom of Saudi Arabia: high level of genetic diversity
found
JOURNAL AIDS Res. Hum. Retroviruses 23 (5), 667-674 (2007)
PUBMED 17530991
REFERENCE 2 (bases 1 to 898)
Show all sequences for reference 2
AUTHORS Badreddine,S., Smith,K., Zyl,H., Bodelle,P., Yamaguchi,J.,
Devare,S. and Brennan,C.
TITLE Direct Submission
JOURNAL Submitted (24-JAN-2006) 09NG, Abbott Laboratories, 100 Abbott Park
Rd., Abbott Park, IL 60064-6015, USA
FEATURES Location/Qualifiers
source 1..898
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="J11455"
/isolation_source="plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Saudi Arabia"
gene <1..888
/gene="pol"
CDS <1..888
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABD33642.1"
/db_xref="GI:87242168"
/translation="AGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPSVVAKEIV
ASCDKCQVKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQ
ETAYFLLKLAGRWPVKAIHTDNGSNFTSTAVKAACWWAGIKQEFGIPYNPQSQGVVES
MNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTK
ELQXQITKLQNFRVYYRDSRDPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIR
DYGKQVAGDDCVASRQNED"
BASE COUNT 349 a 135 c 225 g 188 t 1 other
ORIGIN
1 gctggaatca ggaaggtact atttttagat ggaatagata aggcccaaga agaacatgag
61 aaatatcaca gtaattggag agcaatggct agtgatttta acctgccatc tgtggtagca
121 aaagaaatag tagccagctg tgataaatgt caggtaaaag gagaagccat gcatggacaa
181 gtagactgta gtccaggaat atggcaatta gactgtacac atttagaagg aaaagttatc
241 ctggtagcag ttcatgtagc cagtggatac atagaagcag aagtcattcc agcagagaca
301 gggcaggaaa cagcatactt cctgttaaaa ttagcaggaa gatggccagt aaaagcaata
361 catacagaca atggcagcaa cttcaccagc actgcggtta aggccgcctg ttggtgggca
421 gggattaagc aggaatttgg cattccctac aatccccaaa gtcaaggagt agtagaatct
481 atgaataaag aattaaagaa aattatagga caggtaagag atcaggctga acatcttaag
541 acagcagtac aaatggcagt attcatccac aattttaaaa gaaaaggggg gattgggggg
601 tacagtgcag gagaaagaat aatagacata atagcaacag acatacaaac taaagaatta
661 caaaamcaaa ttacaaaact tcaaaatttt cgggtttatt acagggacag cagagatcca
721 ctttggaaag gaccagcaaa gcttctctgg aaaggtgaag gggcagtagt aatacaagat
781 aatagtgaca taaaagtagt gccaagaaga aaagcaaaga tcattaggga ttatggaaaa
841 caggtggcag gtgatgattg tgtggcaagt agacagaatg aggattaaaa catggaaa
//
last modified: Tue May 31 10:56 2022