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LOCUS	    DQ346009		     627 bp    DNA     linear	VRL 15-AUG-2006
DEFINITION  Simian immunodeficiency virus isolate 1/52N.20-7 nef protein (nef)
	    gene, partial cds
ACCESSION   DQ346009
VERSION     DQ346009.1 GI:85680527
KEYWORDS    .
SOURCE	    Simian immunodeficiency virus
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 627)
            Show all sequences for reference 1
  AUTHORS   Noel,R.J., Toro-Bahamonde,A., Marrero-Otero,Z., Orsini,S.,
	    Verma,A.S., Kumar,R. and Kumar,A.
  TITLE     Lack of correlation between SIV-Nef evolution and rapid disease
	    progression in morphine-dependent nonhuman primate model of AIDS.
  JOURNAL   AIDS Res. Hum. Retroviruses 22 (8), 817-23 (2006)
  PUBMED    16910840
REFERENCE   2 (bases 1 to 627)
            Show all sequences for reference 2
  AUTHORS   Noel,R.J. Jr.., Toro-Bahamonde,A., Marrero-Otero,Z., Kumar,R.,
	    Yamamura,Y. and Kumar,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2005) Biochemistry, Ponce School of Medicine, 395
	    Urb. Industrial Reparada, Zona 2, Ponce, PR 00716, USA
FEATURES             Location/Qualifiers
     source	     1..627
		     /organism="Simian immunodeficiency virus"
		     /proviral="Simian immunodeficiency virus"
		     /mol_type="genomic DNA"
		     /isolate="1/52N.20-7"
		     /db_xref="taxon:11723"
     gene	     1..>627
		     /gene="nef"
     CDS	     1..>627
		     /gene="nef"
		     /codon_start="1"
		     /transl_table="1"
		     /product="nef protein"
		     /protein_id="ABC72464.1"
		     /db_xref="GI:85680528"
		     /translation="MGGAISMRRSRSSGDLRQRLLRARGETYGRLLGEVEDGYSQSPG
		     GLDKGLGSLSCEGQKYNQGQYMNTPWRNPAEEREKLAYRKQNMDDKDEEDDDLVGVSV
		     RPKVPLRTMSYKLAIDVSHFIKEKGGPEGIYYSARRHRILDIYLEKEEGIIPDWQDYT
		     SGPGIRYPKTFGWLWKLVPVNVSDEAQEDEEHYLMHPAQTSQWDDPWGE"
BASE COUNT	210 a	 104 c	  178 g    135 t
ORIGIN
       1 atgggtggag ctatttccat gaggcggtcc aggtcgtctg gagatctgcg acagagactc 
      61 ttgcgggcgc gtggggagac ttatgggaga ctcttaggag aggtggaaga tggatactcg 
     121 caatccccag gaggattaga caagggcttg ggctcactct cttgtgaggg acagaaatac 
     181 aatcagggac agtatatgaa tactccatgg agaaacccag ctgaagagag agaaaaatta 
     241 gcatacagaa aacaaaatat ggatgataaa gatgaggaag atgatgactt ggtaggggta 
     301 tcagtgaggc caaaagttcc cctaagaaca atgagttaca aattggcaat agacgtgtct 
     361 cattttataa aagaaaaggg gggaccggaa gggatttatt acagtgcaag aagacataga 
     421 atcttagaca tatacttaga aaaggaagaa ggcatcatac cagattggca ggattatacc 
     481 tcaggaccag gaattagata cccaaagaca tttggctggc tatggaaatt agtccctgta 
     541 aatgtatcag atgaggcaca ggaggatgag gagcattatt taatgcatcc agctcaaact 
     601 tcccagtggg atgacccttg gggagag
//
last modified: Tue May 31 10:56 2022


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