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HIV Sequence Database



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LOCUS	    DQ296746		    2555 bp    RNA     linear	VRL 14-MAR-2006
DEFINITION  HIV-1 clone 10051999_F4 from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   DQ296746
VERSION     DQ296746.1 GI:89277445
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2555)
            Show all sequences for reference 1
  AUTHORS   Frost,S.D.W., Wrin,T., Smith,D.M., Kosakovsky Pond,S.L., Liu,Y.,
	    Paxinos,E., Chappey,C., Galovich,J., Beauchaine,J.,
	    Petropoulos,C.J., Little,S.J. and Richman,D.D.
  TITLE     Neutralizing antibody responses drive the evolution of human
	    immunodeficiency virus type 1 envelope during recent HIV infection
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 102 (51), 18514-18519 (2005)
  PUBMED    16339909
REFERENCE   2 (bases 1 to 2555)
            Show all sequences for reference 2
  AUTHORS   Frost,S.D.W., Wrin,T., Smith,D.M., Kosakovsky Pond,S.L., Liu,Y.,
	    Paxinos,E., Chappey,C., Galovich,J., Beauchaine,J.,
	    Petropoulos,C.J., Little,S.J. and Richman,D.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2005) Pathology, University of California, San
	    Diego, 9500 Gilman Drive, La Jolla, CA 92093-0679, USA
FEATURES             Location/Qualifiers
     source	     1..2555
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="patient 050100839"
		     /db_xref="taxon:11676"
		     /clone="10051999_F4"
		     /country="USA"
		     /note="genotype: B"
     gene	     <1..>2555
		     /gene="env"
     CDS	     <1..>2555
		     /gene="env"
		     /codon_start="3"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ABD66829.1"
		     /db_xref="GI:89277446"
		     /translation="EIKKSYQNLWKGGILLLWKWGTMLLGILMICNATEQLWVTVYYG
		     VPVWKEATTTLFCASDAKAYDPEVHNVWATHACVPTDPNPQEVVLGSVTENFNMWKND
		     MVEQMHEDIISLWDASLKPCVKLTPLCVTLNCTDVNATNTTNSSISMEGEIKNCSFNI
		     TTNMRDKVQKEYSLFYKLDVVPIDNNTNYRLISCNTSVITQACPKVTFEPIPIHYCTP
		     AGFAILKCNNKTFSGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVIRSENFT
		     NNAKIIIVHLNESVEINCTRPNNNTRKGIHIGPGRAFYATEIIGDIRQAHCNISRAKW
		     NKTLSQIVGKLREQFENKTIVFNQSSGGDPEIVMHNFNCGGEFFYCNTTQLFNSTWND
		     TAGSSNNGENSTTITLPCRMRQIINMWQEVGKAMYAPPIRGPIKCSSNITGLLLTRDG
		     GKNTNTSENETEIFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRA
		     VGLGAMFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQLTV
		     WGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTSVPWNTSWSGNRSLTDIWNNMT
		     WMEWEREIDNYTNLIYSLILESQNQQDKNEKELLELDKWASLWNWFDITNWLWYIKIF
		     IMIVGGLVGLRIVFTVFSIVNRVRQGYSPLSFQTHLPAPRGPDRPEGIEEEGGERGRD
		     RSGRLVTGFLELIWIDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLLQ
		     YWIQELKNSAVSLLNATAIAVAEGTDRVIEVLQRAGRALLHIPRRIRQGAERA"
BASE COUNT	884 a	 443 c	  606 g    622 t
ORIGIN
       1 cggagatcaa gaagagttat caaaacttgt ggaaaggggg catcttgctc ttgtggaaat 
      61 ggggcaccat gctccttggg atattaatga tttgtaatgc tacagaacaa ttgtgggtca 
     121 cagtctatta tggggtacct gtgtggaaag aagcaaccac cactttattt tgtgcatcag 
     181 atgctaaagc atatgatcca gaggtacata atgtttgggc cacacatgcc tgtgtaccca 
     241 cagaccccaa cccacaagaa gtagtattag gaagtgtgac tgaaaatttt aacatgtgga 
     301 aaaatgacat ggtagaacag atgcatgagg atataatcag tttatgggat gcaagcttaa 
     361 agccatgtgt aaaattaacc ccactctgtg ttactctaaa ttgcactgat gtgaatgcta 
     421 ctaataccac caatagtagc atatcgatgg agggagaaat aaaaaactgc tctttcaata 
     481 tcaccacaaa catgagagat aaggtgcaga aagaatattc acttttttat aaacttgatg 
     541 tagtaccaat agataataat accaactata ggttgataag ttgtaacacc tcagtcatta 
     601 cccaggcttg tccaaaggta acctttgagc caatccccat acattattgt accccggctg 
     661 gttttgcgat tctaaagtgt aacaataaaa cgttcagtgg aacaggacca tgcaaaaatg 
     721 tcagcacagt acaatgtaca catggaatta agccagtagt atcaactcaa ttgctgttaa 
     781 atggaagtct agcagaagaa gagatagtaa ttagatctga aaatttcaca aacaatgcta 
     841 aaatcatcat agtacatcta aacgaatctg tagaaattaa ttgtacaagg cctaacaaca 
     901 atacaagaaa aggtatacat ataggaccag gaagagcatt ttatgcaaca gaaataatag 
     961 gagatataag acaagcacat tgtaacatta gtagagcaaa atggaataaa actttaagtc 
    1021 agatagttgg aaaattaaga gaacaatttg agaataaaac aatagtcttt aatcaatcct 
    1081 caggagggga cccagaaatt gtaatgcaca attttaattg tggaggggag tttttctact 
    1141 gtaatacaac acaactgttt aatagtactt ggaatgatac tgcagggtca agtaacaatg 
    1201 gagaaaatag cacaaccatc acgctcccat gcagaatgag acaaattata aacatgtggc 
    1261 aggaagtggg aaaagcaatg tacgcccctc ccatcagagg accaattaaa tgttcttcaa 
    1321 atattacagg gctgctatta acaagagatg gtggtaagaa cacgaacacg agcgagaatg 
    1381 agactgagat cttcagacct gggggaggag atatgaggga caattggaga agtgaattat 
    1441 ataaatataa agtagtaaaa attgaaccat taggaatagc acccaccaag gcaaagagaa 
    1501 gagtggtgca gagagaaaaa agagcagtgg gactaggagc tatgttcctt gggttcttgg 
    1561 gagcagcagg aagcactatg ggcgcagcgt cagtgacgct gacggtacag gccagacaat 
    1621 tattgtctgg tatagtgcaa cagcagaaca atctgctgaa ggctattgag gcgcagcagc 
    1681 acctgttgca actcacagtc tggggcatca agcagctcca ggcaagaatc ctggctgtgg 
    1741 aaagatacct aaaggaccaa cagctcctgg ggatttgggg ttgctctgga aaactcattt 
    1801 gcaccacttc tgtgccttgg aatactagtt ggagtgggaa tagatctctg actgatattt 
    1861 ggaacaacat gacttggatg gagtgggaaa gagaaattga caattacaca aacttaatat 
    1921 actccttaat tttagaatcg cagaaccaac aagacaaaaa tgaaaaagag ttattggaat 
    1981 tggataaatg ggcaagtttg tggaattggt ttgacataac aaattggctg tggtatataa 
    2041 aaatattcat catgatagta ggaggcttgg tagggttaag aatagttttt actgtatttt 
    2101 ctatagtgaa tagagttagg cagggatatt caccactatc gtttcagacc cacctcccag 
    2161 ctccgagggg acccgacagg cccgaaggaa tcgaagaaga aggtggagag agaggcagag 
    2221 acagatccgg acgattagtg actggattct tagaacttat ctggatcgat ctgaggagcc 
    2281 tgtgcctctt cagctaccac cgcttgagag acttactctt gattgtaacg aggattgtgg 
    2341 aacttctggg acgcaggggg tgggaagctc tgaaatattg gtggaatctc ctacagtatt 
    2401 ggatacagga actaaagaat agtgctgtta gcttgctcaa cgccacagcc atagcagtag 
    2461 ctgaggggac agatagggtt atagaagtat tacaaagagc tggtagagct cttctccaca 
    2521 tacctagaag aataagacag ggggccgaaa gggct
//
last modified: Tue May 31 10:56 2022


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