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LOCUS	    DQ296738		    2549 bp    RNA     linear	VRL 14-MAR-2006
DEFINITION  HIV-1 clone 07201999_G8 from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   DQ296738
VERSION     DQ296738.1 GI:89277429
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2549)
            Show all sequences for reference 1
  AUTHORS   Frost,S.D.W., Wrin,T., Smith,D.M., Kosakovsky Pond,S.L., Liu,Y.,
	    Paxinos,E., Chappey,C., Galovich,J., Beauchaine,J.,
	    Petropoulos,C.J., Little,S.J. and Richman,D.D.
  TITLE     Neutralizing antibody responses drive the evolution of human
	    immunodeficiency virus type 1 envelope during recent HIV infection
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 102 (51), 18514-18519 (2005)
  PUBMED    16339909
REFERENCE   2 (bases 1 to 2549)
            Show all sequences for reference 2
  AUTHORS   Frost,S.D.W., Wrin,T., Smith,D.M., Kosakovsky Pond,S.L., Liu,Y.,
	    Paxinos,E., Chappey,C., Galovich,J., Beauchaine,J.,
	    Petropoulos,C.J., Little,S.J. and Richman,D.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2005) Pathology, University of California, San
	    Diego, 9500 Gilman Drive, La Jolla, CA 92093-0679, USA
FEATURES             Location/Qualifiers
     source	     1..2549
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="patient 050100839"
		     /db_xref="taxon:11676"
		     /clone="07201999_G8"
		     /country="USA"
		     /note="genotype: B"
     gene	     <1..>2549
		     /gene="env"
     CDS	     <1..>2549
		     /gene="env"
		     /codon_start="3"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ABD66821.1"
		     /db_xref="GI:89277430"
		     /translation="VTEIKKSYQNLWKGGILLLWKWGTMLLGILMICNATEQLWVTVY
		     YGVPVWKEATTTLFCASDAKAYDTEVRNVWATHACVPTDPHPQEVVLGNVTENFNMWK
		     NDMVEQMHEDIISLWDASLKPCVKLTPLCVTLNCTDVNANNTNSSISMEGEIKNCSFN
		     ITTNMRDKVQKEYSLFYKLDVVPIDNNTNYRLISCNTSVITQACPKVTFEPIPIHYCT
		     PAGFAILKCNNKTFSGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVIRSENF
		     TNNAKIIIVHLNESVEINCTRPNNNTRKGIHIGPGRAFYATEIIGDIRQAYCNISRAK
		     WNKTLSQIVGKLREQFKNKTIVFNQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWN
		     DTAGSSNNGENSTTITLPCKIRQIINMWQEVGKAMYAPPIRGPIKCSSNITGLLLTRD
		     GGKHTNTSENETEIFRPGGGNMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKR
		     AVGLGAMFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQLT
		     VWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTSVPWNTSWSGNRSLTDIWNNM
		     TWMEWEREIDNYTNLIYSLILESQNQQDKNEKELLELDKWASLWNWFDITNWLWYIKI
		     FIMIVGGMVGLRIVFTVFSIVNRVRQGYSPLSFQTHLPAPRGPDRPEGIEEEGGERGR
		     DRSGRLVNGFLELIWIDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLL
		     QYWIQELKNSAVSLLNATATAVAEGTDRVIEVLQRAGRALFHMPRRIRQGA"
BASE COUNT	883 a	 437 c	  605 g    624 t
ORIGIN
       1 gagtgacgga gatcaagaag agttatcaaa acttgtggaa agggggcatc ttgctcttgt 
      61 ggaaatgggg caccatgctc cttgggatat taatgatttg taatgctaca gaacaattgt 
     121 gggtcacagt ctattatggg gtacctgtgt ggaaagaagc aaccaccact ttattttgtg 
     181 catcagatgc taaagcatat gatacagagg tacgtaatgt ttgggccaca catgcctgtg 
     241 tacccacaga cccccaccca caagaagtag tattaggaaa tgtgactgaa aattttaaca 
     301 tgtggaaaaa tgacatggta gaacagatgc atgaggatat aatcagttta tgggatgcaa 
     361 gcttaaagcc atgtgtaaaa ttaaccccac tctgtgttac tctaaattgc actgatgtga 
     421 atgctaataa caccaatagt agcatatcga tggagggaga aataaaaaac tgctctttca 
     481 atatcaccac aaacatgaga gataaggtgc agaaggaata ttcacttttt tataaacttg 
     541 atgtagtacc aatagataat aataccaact ataggttgat aagttgtaac acctcagtca 
     601 ttacccaggc ttgtccaaag gtaacctttg agccaatccc catacattat tgtaccccgg 
     661 ctggttttgc gattctaaag tgtaacaata aaacgttcag tggaacagga ccatgcaaaa 
     721 atgtcagcac agtacaatgt acacatggaa ttaagccagt agtatcaact caattgctgt 
     781 taaatggaag tctagcagaa gaagagatag taattagatc tgaaaatttc acaaacaatg 
     841 ctaaaatcat catagtacat ctgaacgaat ctgtagaaat taattgtaca aggcctaaca 
     901 acaatacaag aaaaggtata catataggac caggaagagc attttatgca acagaaataa 
     961 taggagatat aagacaagca tattgtaaca ttagtagagc aaaatggaat aaaactttaa 
    1021 gtcagatagt tggaaaatta agagaacaat ttaagaataa aacaatagtc tttaatcaat 
    1081 cctcaggagg ggacccagaa attgtaatgc acagttttaa ttgtggaggg gagtttttct 
    1141 actgtaatac aacacagctg tttaatagta cttggaatga tactgcaggg tcaagtaaca 
    1201 atggagaaaa tagcacaact atcacgctcc catgcaaaat aagacaaatt ataaacatgt 
    1261 ggcaggaagt aggaaaagca atgtatgccc ctcccatcag aggaccaatt aaatgttctt 
    1321 caaatattac agggctgcta ttaacaagag atggtggtaa gcacacgaac acgagcgaga 
    1381 atgagactga gatcttcaga cctgggggag gaaatatgag ggacaattgg agaagtgaat 
    1441 tatataaata taaagtagta aaaattgaac cattaggaat agcacccacc aaggcaaaga 
    1501 gaagagtggt gcagagagaa aaaagagcag tgggactagg agctatgttc cttgggttct 
    1561 tgggagcagc aggaagcact atgggcgcag cgtcagtgac gctgacggta caggccagac 
    1621 aattattgtc tggtatagtg caacagcaga acaatctgct gaaggctatt gaggcgcaac 
    1681 agcacctgtt gcaactcaca gtctggggca tcaagcagct ccaggcaaga atcctggctg 
    1741 tggaaagata cctaaaggac caacagctcc tggggatttg gggttgctct ggaaaactca 
    1801 tttgcaccac ttctgtgcct tggaatacta gttggagtgg gaatagatct ctgactgata 
    1861 tttggaacaa catgacttgg atggagtggg aaagagaaat tgacaattac actaacttaa 
    1921 tatactcctt aattttagaa tcgcagaacc aacaagacaa aaatgaaaaa gagttattgg 
    1981 aattggataa atgggcaagt ttgtggaatt ggtttgacat aacaaattgg ctgtggtata 
    2041 taaaaatatt catcatgata gtaggaggca tggtagggtt aagaatagtt tttactgtat 
    2101 tttctatagt gaatagagtt aggcagggat attcaccact atcgtttcag acccacctcc 
    2161 cagctccgag gggacccgac aggcccgaag gaatcgaaga agaaggtgga gagagaggca 
    2221 gagacagatc cggacgatta gtgaatggat tcttagaact tatctggatc gatctgagga 
    2281 gcctgtgcct cttcagctac caccgcttga gagacttact cttgattgta acgaggattg 
    2341 tggaacttct gggacgcagg gggtgggaag ctctgaaata ttggtggaat ctcctacagt 
    2401 attggataca ggaactaaag aatagtgctg ttagcttgct caacgccaca gccacagcag 
    2461 tagctgaggg gacagatagg gttatagaag tattacaaag agctggtaga gctcttttcc 
    2521 acatgcctag aagaataagg cagggggcc
//
last modified: Tue May 31 10:56 2022


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