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LOCUS	    DQ296708		    2514 bp    RNA     linear	VRL 14-MAR-2006
DEFINITION  HIV-1 clone 01121999_13 from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   DQ296708
VERSION     DQ296708.1 GI:89277369
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2514)
            Show all sequences for reference 1
  AUTHORS   Frost,S.D.W., Wrin,T., Smith,D.M., Kosakovsky Pond,S.L., Liu,Y.,
	    Paxinos,E., Chappey,C., Galovich,J., Beauchaine,J.,
	    Petropoulos,C.J., Little,S.J. and Richman,D.D.
  TITLE     Neutralizing antibody responses drive the evolution of human
	    immunodeficiency virus type 1 envelope during recent HIV infection
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 102 (51), 18514-18519 (2005)
  PUBMED    16339909
REFERENCE   2 (bases 1 to 2514)
            Show all sequences for reference 2
  AUTHORS   Frost,S.D.W., Wrin,T., Smith,D.M., Kosakovsky Pond,S.L., Liu,Y.,
	    Paxinos,E., Chappey,C., Galovich,J., Beauchaine,J.,
	    Petropoulos,C.J., Little,S.J. and Richman,D.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2005) Pathology, University of California, San
	    Diego, 9500 Gilman Drive, La Jolla, CA 92093-0679, USA
FEATURES             Location/Qualifiers
     source	     1..2514
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="patient 050100839"
		     /db_xref="taxon:11676"
		     /clone="01121999_13"
		     /country="USA"
		     /note="genotype: B"
     gene	     <1..>2514
		     /gene="env"
     CDS	     <1..>2514
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ABD66791.1"
		     /db_xref="GI:89277370"
		     /translation="RVTEIKKSYQNLWKGGILLLWKWGTMLLGILMICNATEQLWVTV
		     YYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMW
		     KNDMVEQMHEDIISLWDASLEPCVKLTPLCVTLNCTDVNANNTTNSSISMEGEIKNCS
		     FNITTNMRDKVQKEYSLFYKLDVVPIDNNTNYRLISCNTSVITQACPKVTFEPIPIHY
		     CTPAGFAILKCNNKTFSGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVIRSE
		     NFTNNAKIIIVHLNESVEINCTRPNNNTRKGIHIGPGRAFYATEIIGDIRQAYCNISR
		     AKWNKTLSQIVGKLREQFENKTIVFNQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNST
		     WNDTAGSSNNGENSTTITLPCRIRQIINMWQEVGKAMYAPPIRGPIKCSSNITGLLLT
		     RDGGKNTNTSENETEIFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQRE
		     KRAVGLGAMFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQ
		     LTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTSVPWNTSWSGNRSLTDIWN
		     NMTWMEWEREIDNYTNLIYSLILESQNQQDKNEKELLELDKWASLWNWFDITNWLWYI
		     KIFIMIVGGLVGLRIVFTVFSIVNRVRQGYSPLSFQTHLPAPRGPDRPEGIEEEGGER
		     GRDRSGRLVNGFLELIWIDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWN
		     LPQYWIQELKNSAVSLLNATAIAVAEGTDRVIEVLQGAGR"
BASE COUNT	875 a	 428 c	  596 g    615 t
ORIGIN
       1 agagtgacgg agatcaagaa gagttatcaa aacttgtgga aagggggcat cttgctcttg 
      61 tggaaatggg gcaccatgct ccttgggata ttaatgattt gtaatgctac agaacaattg 
     121 tgggtcacag tctattatgg ggtacctgtg tggaaagaag caaccaccac tttattttgt 
     181 gcatcagatg ctaaagcata tgatacagag gtacataatg tttgggccac acatgcctgt 
     241 gtacccacag accccaaccc acaagaagta gtattaggaa atgtgactga aaattttaac 
     301 atgtggaaaa atgacatggt agaacagatg catgaggata taatcagttt atgggatgca 
     361 agcttagagc catgtgtaaa attaacccca ctctgtgtta ctctaaattg cactgatgtg 
     421 aatgctaata ataccaccaa tagtagcata tcgatggagg gagaaataaa aaactgctct 
     481 ttcaatatca ccacaaacat gagagataag gtgcagaaag aatattcact tttttataaa 
     541 cttgatgtag taccaataga taataatacc aactataggt tgataagttg taacacctca 
     601 gtcattaccc aggcttgtcc aaaggtaacc tttgagccaa tccccataca ttattgtacc 
     661 ccggctggtt ttgcgattct aaagtgtaac aataaaacgt tcagtggaac aggaccatgc 
     721 aaaaatgtca gcacagtaca atgtacacat ggaattaagc cagtagtatc aactcaattg 
     781 ctgttaaatg gaagtctagc agaagaagag atagtaatta gatctgaaaa tttcacaaac 
     841 aatgctaaaa tcatcatagt acatctgaac gaatctgtag aaattaattg tacaaggcct 
     901 aacaacaata caagaaaagg tatacatata ggaccaggaa gagcatttta tgcaacagaa 
     961 ataataggag atataagaca agcatattgt aacattagta gagcaaaatg gaataaaact 
    1021 ttaagtcaga tagttggaaa attaagagaa caatttgaga ataaaacaat agtctttaat 
    1081 caatcctcag gaggggaccc agaaattgta atgcacagtt ttaattgtgg aggggagttt 
    1141 ttctactgta atacaacaca actgtttaat agtacttgga atgatactgc agggtcaagt 
    1201 aacaatggag aaaatagcac aaccatcacg ctcccatgca gaataagaca aattataaac 
    1261 atgtggcagg aagtaggaaa agcaatgtat gcccctccca tcagaggacc aattaaatgt 
    1321 tcttcaaata ttacagggct gctattaaca agagatggtg gtaagaacac gaacacgagc 
    1381 gagaatgaga ctgagatctt cagacctggg ggaggagata tgagggacaa ttggagaagt 
    1441 gaattatata aatataaagt agtaaaaatt gaaccattag gaatagcacc caccaaggca 
    1501 aagagaagag tggtgcagag agaaaaaaga gcagtgggac taggagctat gttccttggg 
    1561 ttcttgggag cagcaggaag cactatgggc gcagcgtcag tgacgctgac ggtacaggcc 
    1621 agacaattat tgtctggtat agtgcaacag cagaacaatc tgctgaaggc tattgaggcg 
    1681 caacagcacc tgttgcaact cacagtctgg ggcatcaagc agctccaggc aagaatcctg 
    1741 gctgtggaaa gatacctaaa ggaccaacag ctcctgggga tttggggttg ctctggaaaa 
    1801 ctcatttgca ccacttctgt gccttggaat actagttgga gtgggaatag atctctgact 
    1861 gatatttgga acaacatgac ttggatggag tgggaaagag aaattgacaa ttacacaaac 
    1921 ttaatatact ccttaatttt agaatcgcag aaccaacaag acaaaaatga aaaagagtta 
    1981 ttggaattgg ataaatgggc aagtttgtgg aattggtttg acataacaaa ttggctgtgg 
    2041 tatataaaaa tattcatcat gatagtagga ggcttggtag ggttaagaat agtttttact 
    2101 gtattttcta tagtgaatag agttaggcag ggatattcac cactatcgtt tcagacccac 
    2161 ctcccagccc cgaggggacc cgacaggccc gaaggaatcg aagaagaagg tggagagaga 
    2221 ggcagagaca gatccggacg attagtgaat ggattcttag aacttatctg gatcgatctg 
    2281 aggagcctgt gcctcttcag ctaccaccgc ttgagagact tactcttgat tgtaacgagg 
    2341 attgtggaac ttctgggacg cagggggtgg gaagctctga aatattggtg gaatctccca 
    2401 cagtattgga tacaggaact aaagaatagt gctgttagct tgctcaacgc cacagccata 
    2461 gcagtagctg aggggacaga tagggttata gaagtattac aaggagctgg taga
//
last modified: Tue May 31 10:56 2022


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