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LOCUS	    DQ113028		    1280 bp    RNA     linear	VRL 15-AUG-2006
DEFINITION  HIV-1 isolate CB_120 from Cuba pol protein (pol) gene, partial cds
ACCESSION   DQ113028
VERSION     DQ113028.1 GI:73810388
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1280)
            Show all sequences for reference 1
  AUTHORS   Pérez,L., Thomson,M.M., Bleda,M.J., Aragonés,C., González,Z.,
	    Pérez,J., Sierra,M., Casado,G., Delgado,E. and Nájera,R.
  TITLE     HIV Type 1 molecular epidemiology in cuba: high genetic diversity,
	    frequent mosaicism, and recent expansion of BG intersubtype
	    recombinant forms.
  JOURNAL   AIDS Res. Hum. Retroviruses 22 (8), 724-33 (2006)
  PUBMED    16910827
REFERENCE   2 (bases 1 to 1280)
            Show all sequences for reference 2
  AUTHORS   Perez,L., Thomson,M.M., Aragones,C., Gonzalez,Z., Casado,G.,
	    Sierra,M., Delgado,E., Perez,J. and Najera,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUN-2005) Centro Nacional de Microbiologia, Instituto
	    de Salud Carlos III, Ctra. Majadahonda-Pozuelo, Km. 2, Majadahonda,
	    Madrid 28220, Spain
FEATURES             Location/Qualifiers
     source	     1..1280
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="CB_120"
		     /db_xref="taxon:11676"
		     /country="Cuba"
     gene	     <1..>1280
		     /gene="pol"
     CDS	     <1..>1280
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAZ86156.1"
		     /db_xref="GI:73810389"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDINLPGKWRP
		     KMIGGIGGFIKVRQYDQIPIEICGQKAVGTILVGPTPVNIIGRNLLTQLGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSINNETPGTRYQYNVLPQGWKGSPAIFQSSMTKILDPFRKQNPE
		     IVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIKLPEKESWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVI
		     TLTEEAELELAENREILKEPVHGVYYDPSKDLIA"
BASE COUNT	512 a	 210 c	  269 g    289 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccctt gtcacaataa agataggggg acagctaaag 
      61 gaagctctac tagatacagg agcagatgat acagtattag aagacataaa tttgccagga 
     121 aaatggagac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 caaataccca tagaaatctg tggacagaaa gctgtaggta caatattagt agggcctaca 
     241 cctgtcaaca taattggaag aaatttgttg actcagcttg gctgcacttt aaattttcca 
     301 attagcccta ttgaaactgt accagtaaaa ttaaagccag ggatggatgg cccaaaagtg 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tacagagatg 
     421 gaaaaagaag gaaaaatttc aaaaattggg cctgagaatc catataatac tccaatattt 
     481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagattttag agaacttaat 
     541 aagagaaccc aggacttctg ggaggttcaa ttaggaatac cacatcctgc agggctaaag 
     601 aagaaaaaat cagtaacagt attggatgta ggtgatgcat atttttcagt tcccttagat 
     661 aaagaattta gaaagtatac cgcatttacc atacccagta taaacaatga aacaccaggg 
     721 actagatatc agtataatgt gcttccacag ggatggaaag gatcaccggc aatatttcaa 
     781 agtagcatga caaaaatcct agatcccttt agaaaacaaa atccagaaat agttatctat 
     841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagagcaaaa 
     901 atagaggaat taagggaaca tctgttgagg tggggattta ccacaccaga caaaaaacat 
     961 cagaaagaac ctccgttcct ttggatgggt tatgaactcc atcccgataa gtggacagta 
    1021 cagcctataa aactgccaga aaaagaaagc tggactgtca atgacataca gaagttagtg 
    1081 ggaaaactaa attgggcgag ccagatctat gcaggaatta aagtaaaaca gttatgtaaa 
    1141 ctccttaggg gagccaaagc actaacagaa gtaataacat taacagaaga agcagaatta 
    1201 gaactggcag aaaacaggga aattctaaaa gaaccagtgc atggagtgta ctatgaccca 
    1261 tcaaaagact taatagcaga 
//
last modified: Tue May 31 10:56 2022


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