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LOCUS	    DQ112991		    1233 bp    RNA     linear	VRL 15-AUG-2006
DEFINITION  HIV-1 isolate CB_054 from Cuba pol protein (pol) gene, partial cds
ACCESSION   DQ112991
VERSION     DQ112991.1 GI:73810314
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1233)
            Show all sequences for reference 1
  AUTHORS   Pérez,L., Thomson,M.M., Bleda,M.J., Aragonés,C., González,Z.,
	    Pérez,J., Sierra,M., Casado,G., Delgado,E. and Nájera,R.
  TITLE     HIV Type 1 molecular epidemiology in cuba: high genetic diversity,
	    frequent mosaicism, and recent expansion of BG intersubtype
	    recombinant forms.
  JOURNAL   AIDS Res. Hum. Retroviruses 22 (8), 724-33 (2006)
  PUBMED    16910827
REFERENCE   2 (bases 1 to 1233)
            Show all sequences for reference 2
  AUTHORS   Perez,L., Thomson,M.M., Aragones,C., Gonzalez,Z., Casado,G.,
	    Sierra,M., Delgado,E., Perez,J. and Najera,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUN-2005) Centro Nacional de Microbiologia, Instituto
	    de Salud Carlos III, Ctra. Majadahonda-Pozuelo, Km. 2, Majadahonda,
	    Madrid 28220, Spain
FEATURES             Location/Qualifiers
     source	     1..1233
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="CB_054"
		     /db_xref="taxon:11676"
		     /country="Cuba"
     gene	     <1..>1233
		     /gene="pol"
     CDS	     <1..>1233
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAZ86119.1"
		     /db_xref="GI:73810315"
		     /translation="PQITLWQRPIVTIKXGGQLIEALLDTGADDTVLEGINLPGRWKP
		     KIIGGIGGFIKVRQYEQIPIEICGHKVLSTVLVGPTPVNVVGRNLMTQLGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICXELEQDGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKIVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIP
		     LDEDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQYSMTKILEPFRKQNPE
		     IVIYQYVDDLYVGSDLEIGQHRIKIEELRQYLWRWGFYTPDKKHQKEPPFRWMGYELH
		     PDKWTVQPIKLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKSLTEVV
		     PLTEEAELELAENREILKE"
BASE COUNT	491 a	 201 c	  259 g    280 t      2 other
ORIGIN
       1 cctcagatca ctctttggca acgaccaata gtcacaataa agrtaggggg gcaactaata 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagggataaa tttgccagga 
     121 agatggaaac caaaaataat agggggaatt ggaggtttta tcaaagtaag acagtacgaa 
     181 cagataccca tagaaatctg tggacataaa gttctaagta cagtattagt aggacctaca 
     241 cctgtcaacg tagttggaag aaatctgatg actcagcttg gctgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aagcaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg trcagaattg 
     421 gaacaggacg gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gccataaaga aaaaagacag cacgaaatgg agaaaaatag tagacttcag agaacttaat 
     541 aaaagaactc aagacttctg ggaagttcaa ttaggaatac cacatcctgc aggtttaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcaat tcccttagat 
     661 gaagacttca ggaagtatac tgcatttact atacctagta taaacaatga gacaccagga 
     721 gttagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa 
     781 tatagcatga caaaaatctt agagcctttt agaaaacaaa atccagaaat agttatatac 
     841 caatacgtgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaataaaa 
     901 atagaagaac tgagacaata tctgtggagg tggggatttt acacaccaga caaaaaacat 
     961 cagaaagaac ctccattccg ttggatgggc tatgaactcc atcctgataa atggacagta 
    1021 cagcctataa agctgccaga aaaggacagc tggactgtca atgacataca gaaattagtg 
    1081 ggaaaattga attgggcaag ccaaatatat gcagggatta aagtaaggca attatgcaaa 
    1141 ctccttaggg gaaccaaatc attaacagaa gtagtaccac taacagaaga agcagagcta 
    1201 gaactggcag aaaacaggga gattctaaaa gaa
//
last modified: Tue May 31 10:56 2022


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