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LOCUS	    DQ112985		    1274 bp    RNA     linear	VRL 15-AUG-2006
DEFINITION  HIV-1 isolate CB_045 from Cuba pol protein (pol) gene, partial cds
ACCESSION   DQ112985
VERSION     DQ112985.1 GI:73810302
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1274)
            Show all sequences for reference 1
  AUTHORS   Pérez,L., Thomson,M.M., Bleda,M.J., Aragonés,C., González,Z.,
	    Pérez,J., Sierra,M., Casado,G., Delgado,E. and Nájera,R.
  TITLE     HIV Type 1 molecular epidemiology in cuba: high genetic diversity,
	    frequent mosaicism, and recent expansion of BG intersubtype
	    recombinant forms.
  JOURNAL   AIDS Res. Hum. Retroviruses 22 (8), 724-33 (2006)
  PUBMED    16910827
REFERENCE   2 (bases 1 to 1274)
            Show all sequences for reference 2
  AUTHORS   Perez,L., Thomson,M.M., Aragones,C., Gonzalez,Z., Casado,G.,
	    Sierra,M., Delgado,E., Perez,J. and Najera,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUN-2005) Centro Nacional de Microbiologia, Instituto
	    de Salud Carlos III, Ctra. Majadahonda-Pozuelo, Km. 2, Majadahonda,
	    Madrid 28220, Spain
FEATURES             Location/Qualifiers
     source	     1..1274
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="CB_045"
		     /db_xref="taxon:11676"
		     /country="Cuba"
     gene	     <1..>1274
		     /gene="pol"
     CDS	     <1..>1274
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAZ86113.1"
		     /db_xref="GI:73810303"
		     /translation="PQITLWQRPVVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKP
		     KMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
		     PIETVPVTLKPGMDGPKVKQWPLTEEKIKALTEICDEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRLKNPD
		     IVIYQYMDDLYVGSDLEIGQHRAKVEDLRAHLLXWGLYTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIV
		     PLTEEAELELAENREILKEPVHGAYYDPSKDLV"
BASE COUNT	495 a	 215 c	  269 g    293 t      2 other
ORIGIN
       1 cctcaaatca ctctttggca acgaccagtt gttacagtaa aaataggagg gcagttaaaa 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagacataaa cttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 cagatactta tagaaatctg tggaaaaaag gctataggta cagtattagt aggacccaca 
     241 cctgtcaaca taattggaag aaatatgttg actcagattg gttgtacttt aaattttcca 
     301 attagtccta ttgaaactgt accagtaaca ttaaagccag gaatggatgg cccaaaggtc 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tgatgaaatg 
     421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaacc catacaatac tccagtattt 
     481 gctataaaga aaaaggacag cactaaatgg agaaaattag tagatttcag agaactcaat 
     541 aaaagaactc aggacttctg ggaagttcaa ttaggaatac cgcatccagc gggtttaaaa 
     601 aagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcctttagat 
     661 aaagacttta gaaagtacac tgcattcacc atacctagta taaacaatga gacaccagga 
     721 atcaggtacc aatacaatgt gctcccacag ggatggaaag gatcaccagc aatattccag 
     781 agtagcatga caaaaatctt agagcccttt agattaaaga atccagacat agttatctat 
     841 caatacatgg atgacttgta tgtgggatct gatttagaaa taggacagca tagagcaaag 
     901 gtagaggacc tgagagctca tctgttrara tggggacttt acaccccaga caaaaagcat 
     961 caaaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa gtggacagtc 
    1021 cagcctatac agctgccaga caaagacagc tggactgtca atgatataca gaaattagtg 
    1081 ggaaaactaa attgggcaag tcaaatttat ccagggatca aagtaaagca actgtgtaaa 
    1141 ctcctcaggg gagccaaagc actaacagat atagtaccac tgactgaaga agcagaatta 
    1201 gaattggcag agaacaggga gattctaaaa gaacctgtgc atggggcata ttatgaccca 
    1261 tcaaaagact tagt
//
last modified: Tue May 31 10:56 2022


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