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LOCUS AY998507 590 bp RNA linear VRL 27-APR-2005
DEFINITION HIV-1 isolate LB1 from Libya reverse transcriptase (pol) gene,
partial cds
ACCESSION AY998507
VERSION AY998507.1 GI:62865790
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 590)
Show all sequences for reference 1
AUTHORS Yerly,S., Quadri,R., Negro,F., Barbe,K.P., Cheseaux,J.J.,
Burgisser,P., Siegrist,C.A. and Perrin,L.
TITLE Nosocomial outbreak of multiple bloodborne viral infections
JOURNAL J. Infect. Dis. 184 (3), 369-372 (2001)
PUBMED 11443566
REFERENCE 2 (bases 1 to 590)
Show all sequences for reference 2
AUTHORS Yerly,S., Quadri,R., Negro,F., Barbe,K.P., Cheseaux,J.J.,
Burgisser,P., Siegrist,C.A. and Perrin,L.
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) Geneva University Hospital, Laboratory of
Virology, 24 Micheli-Du-Crest, Geneva 14 1211, Switzerland
FEATURES Location/Qualifiers
source 1..590
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="LB1"
/db_xref="taxon:11676"
/country="Libya"
gene <1..>590
/gene="pol"
CDS <1..>590
/gene="pol"
/note="RT"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="AAY17088.1"
/db_xref="GI:62865791"
/translation="EKIKALTDICTEMDKEGKISKIGPENPYDTPIFAIKKKDSTKWR
KLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAF
TIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMIKILEPFRTKNPEMVIYQYMDDLY
VGSDLEIGQHRAKIDELRDHLLRWGFTTPDKKHQKEP"
BASE COUNT 244 a 92 c 116 g 136 t 2 other
ORIGIN
1 gaaaaaataa aagcattaac wgacatttgt acagagatgg acaaagaagg aaaaatttca
61 aaaattgggc ctgaaaatcc atacgatact ccaatatttg ccataaagaa aaaagatagt
121 actaaatgga gaaaattagt agatttcaga gaactcaata agagaactca agacttctgg
181 gaggtccaat taggaatacc acatcccgcg ggattaaaaa agaaaaaatc agtaacagta
241 ctrgatgtgg gggatgcata tttttcagtc cccttagata aagactttag aaagtatact
301 gcattcacta tacctagtgt aaataatgag acaccaggga ttagatatca gtacaatgta
361 cttccacagg gatggaaagg atcaccagca atatttcagg caagtatgat aaaaatctta
421 gagcccttta gaacaaaaaa tccagagatg gtgatctacc aatatatgga tgatttatat
481 gtaggatctg acttagagat agggcagcat agagcaaaaa tagatgagtt aagagatcat
541 ctactaagat ggggatttac cacaccagac aaaaaacatc agaaagaacc
//
last modified: Tue May 31 10:56 2022