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LOCUS AY998494 590 bp RNA linear VRL 27-APR-2005
DEFINITION HIV-1 isolate LA22 from Libya reverse transcriptase (pol) gene,
partial cds
ACCESSION AY998494
VERSION AY998494.1 GI:62865764
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 590)
Show all sequences for reference 1
AUTHORS Yerly,S., Quadri,R., Negro,F., Barbe,K.P., Cheseaux,J.J.,
Burgisser,P., Siegrist,C.A. and Perrin,L.
TITLE Nosocomial outbreak of multiple bloodborne viral infections
JOURNAL J. Infect. Dis. 184 (3), 369-372 (2001)
PUBMED 11443566
REFERENCE 2 (bases 1 to 590)
Show all sequences for reference 2
AUTHORS Yerly,S., Quadri,R., Negro,F., Barbe,K.P., Cheseaux,J.J.,
Burgisser,P., Siegrist,C.A. and Perrin,L.
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) Geneva University Hospital, Laboratory of
Virology, 24 Micheli-Du-Crest, Geneva 14 1211, Switzerland
FEATURES Location/Qualifiers
source 1..590
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="LA22"
/db_xref="taxon:11676"
/country="Libya"
gene <1..>590
/gene="pol"
CDS <1..>590
/gene="pol"
/note="RT"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="AAY17075.1"
/db_xref="GI:62865765"
/translation="EKIKALTDICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWR
KLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAF
TIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMIKILEPFRTKNPEMVIYQYMDDLY
VGSDLEIGQHRAKIDELRDHLLRWGFTTPDKKHQKEP"
BASE COUNT 246 a 91 c 117 g 136 t
ORIGIN
1 gaaaaaataa aagcattaac agacatttgt acagagatgg aaaaggaagg aaaaatttca
61 aaaattgggc ctgaaaatcc atacaatact ccaatatttg ccataaagaa aaaagatagt
121 actaaatgga gaaaattagt agatttcaga gaactcaata agagaactca agacttctgg
181 gaggtccaat taggaatacc acatcccgcg ggattaaaaa agaaaaaatc agtaacagta
241 ctagatgtgg gggatgcata tttttcagtc cccttagata aagactttag aaagtatact
301 gcattcacta tacctagtgt aaataatgag acaccaggga ttagatatca gtacaatgta
361 cttccacagg gatggaaagg atcaccagca atatttcagg caagtatgat aaaaatctta
421 gagcccttta gaacaaaaaa tccagagatg gtgatctacc aatatatgga tgatttatat
481 gtaggatctg acttagagat agggcagcat agagcaaaaa tagatgagtt aagagatcat
541 ctactgagat ggggatttac cacaccagac aaaaaacatc agaaagaacc
//
last modified: Tue May 31 10:56 2022