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LOCUS	    AY998494		     590 bp    RNA     linear	VRL 27-APR-2005
DEFINITION  HIV-1 isolate LA22 from Libya reverse transcriptase (pol) gene,
	    partial cds
ACCESSION   AY998494
VERSION     AY998494.1 GI:62865764
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 590)
            Show all sequences for reference 1
  AUTHORS   Yerly,S., Quadri,R., Negro,F., Barbe,K.P., Cheseaux,J.J.,
	    Burgisser,P., Siegrist,C.A. and Perrin,L.
  TITLE     Nosocomial outbreak of multiple bloodborne viral infections
  JOURNAL   J. Infect. Dis. 184 (3), 369-372 (2001)
  PUBMED    11443566
REFERENCE   2 (bases 1 to 590)
            Show all sequences for reference 2
  AUTHORS   Yerly,S., Quadri,R., Negro,F., Barbe,K.P., Cheseaux,J.J.,
	    Burgisser,P., Siegrist,C.A. and Perrin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2005) Geneva University Hospital, Laboratory of
	    Virology, 24 Micheli-Du-Crest, Geneva 14 1211, Switzerland
FEATURES             Location/Qualifiers
     source	     1..590
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="LA22"
		     /db_xref="taxon:11676"
		     /country="Libya"
     gene	     <1..>590
		     /gene="pol"
     CDS	     <1..>590
		     /gene="pol"
		     /note="RT"
		     /codon_start="1"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="AAY17075.1"
		     /db_xref="GI:62865765"
		     /translation="EKIKALTDICTEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWR
		     KLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAF
		     TIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMIKILEPFRTKNPEMVIYQYMDDLY
		     VGSDLEIGQHRAKIDELRDHLLRWGFTTPDKKHQKEP"
BASE COUNT	246 a	  91 c	  117 g    136 t
ORIGIN
       1 gaaaaaataa aagcattaac agacatttgt acagagatgg aaaaggaagg aaaaatttca 
      61 aaaattgggc ctgaaaatcc atacaatact ccaatatttg ccataaagaa aaaagatagt 
     121 actaaatgga gaaaattagt agatttcaga gaactcaata agagaactca agacttctgg 
     181 gaggtccaat taggaatacc acatcccgcg ggattaaaaa agaaaaaatc agtaacagta 
     241 ctagatgtgg gggatgcata tttttcagtc cccttagata aagactttag aaagtatact 
     301 gcattcacta tacctagtgt aaataatgag acaccaggga ttagatatca gtacaatgta 
     361 cttccacagg gatggaaagg atcaccagca atatttcagg caagtatgat aaaaatctta 
     421 gagcccttta gaacaaaaaa tccagagatg gtgatctacc aatatatgga tgatttatat 
     481 gtaggatctg acttagagat agggcagcat agagcaaaaa tagatgagtt aagagatcat 
     541 ctactgagat ggggatttac cacaccagac aaaaaacatc agaaagaacc 
//
last modified: Tue May 31 10:56 2022


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