HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AY749174		    1069 bp    DNA     linear	VRL 08-SEP-2005
DEFINITION  HIV-1 isolate C94pop from Belgium pol protein (pol) gene, partial
	    cds
ACCESSION   AY749174
VERSION     AY749174.1 GI:58617859
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1069)
            Show all sequences for reference 1
  AUTHORS   Lemey,P., Derdelinckx,I., Rambaut,A., Van Laethem,K., Dumont,S.,
	    Vermeulen,S., Van Wijngaerden,E. and Vandamme,A.M.
  TITLE     Molecular footprint of drug-selective pressure in a human
	    immunodeficiency virus transmission chain
  JOURNAL   J. Virol. 79 (18), 11981-11989 (2005)
  PUBMED    16140774
REFERENCE   2 (bases 1 to 1069)
            Show all sequences for reference 2
  AUTHORS   Lemey,P., Derdelinckx,I., Rambaut,A., Van Laethem,K., Dumont,S.,
	    Vermeulen,S., Van Wijngaerden,E. and Vandamme,A.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-SEP-2004) Immunology and Microbiology, Rega Institute
	    for Medical Science, Minderbroedersstraat 10, Leuven 3000, Belgium
FEATURES             Location/Qualifiers
     source	     1..1069
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="C94pop"
		     /isolation_source="plasma"
		     /db_xref="taxon:11676"
		     /country="Belgium"
     gene	     <1..>1069
		     /gene="pol"
     CDS	     <1..>1069
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAW80549.1"
		     /db_xref="GI:58617860"
		     /translation="PQITLWQRPLVTIKVGGQVKEALLDTGADDTVLEELNLPGKWKP
		     KMIGGIGGFIKVRQYDQIVIEICGKKAIGSVLVGPTPVNIIGRNMLTQLGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPN
		     IVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPINLPEKESWTVNDI"
BASE COUNT	420 a	 172 c	  226 g    251 t
ORIGIN
       1 cctcaaatca ctctttggca gcgacccctt gtcacaataa aagtaggggg ccaggtaaag 
      61 gaagctctct tagatacagg agcagatgat acagtattag aagaattaaa tttgccagga 
     121 aaatggaaac caaaaatgat aggaggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 caaatagtta tagaaatttg tgggaaaaaa gctataggtt cagtattagt aggacctaca 
     241 cctgtcaaca taattggaag aaatatgttg actcagcttg gatgcacact aaattttcca 
     301 attagtccca ttgagactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagcaatttg tgaagaaatg 
     421 gaaaaggaag gaaaaattac aaaaattggg cctgaaaatc catataacac tccagtattt 
     481 gccataaaaa agaaggacag tactaaatgg aggaaattag tagatttcag ggaactcaat 
     541 aaaagaactc aagacttttg ggaagttcaa ttaggaatac cacacccagc agggttaaaa 
     601 aagaaaaagt cagtgacagt gctggatgtg ggggatgcat atttttcagt tcctttagat 
     661 gagagcttca ggaaatatac tgcattcacc atacctagta taaacaatga aacaccaggg 
     721 attagatatc aatataatgt acttccacaa ggatggaaag gatcaccagc aatattccag 
     781 agtagcatga caaaaatctt agagcccttt aggacaaaaa acccaaacat agttatctat 
     841 caatatatgg atgacttgta tgtaggatct gacttagaaa tagggcaaca tagagcaaaa 
     901 atagaggagt taagagaaca tttattgagg tggggattta ccactccaga taagaagcat 
     961 cagaaagaac ccccatttct gtggatgggg tatgaactcc atcctgacaa atggacagta 
    1021 cagcctataa atctgccaga aaaagagagc tggactgtca atgatatac
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.