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LOCUS AY694425 783 bp RNA linear VRL 04-JAN-2005
DEFINITION HIV-1 isolate YBF35 group O from Cameroon reverse transcriptase
(pol) gene, partial cds
ACCESSION AY694425
VERSION AY694425.1 GI:56699143
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 783)
Show all sequences for reference 1
AUTHORS Tuaillon,E., Gueudin,M., Lemee,V., Gueit,I., Roques,P.,
Corrigan,G.E., Plantier,J.C., Simon,F. and Braun,J.
TITLE Phenotypic Susceptibility to Nonnucleoside Inhibitors of
Virion-Associated Reverse Transcriptase From Different HIV Types
and Groups
JOURNAL J. Acquir. Immune Defic. Syndr. 37 (5), 1543-1549 (2004)
PUBMED 15577405
REFERENCE 2 (bases 1 to 783)
Show all sequences for reference 2
AUTHORS Gueudin,M., Braun,J., Plantier,J.-C., Lemee,V., Mauclere,P. and
Simon,F.
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2004) Virology, CHU Charles Nicolle, 1 rue de
Germont, Rouen 76031 cedex, France
COMMENT Sampling date was entered in the database based on previous data
for these samples.
FEATURES Location/Qualifiers
source 1..783
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="YBF35"
/db_xref="taxon:11676"
/country="Cameroon"
/note="group: O"
gene <1..>783
/gene="pol"
CDS <1..>783
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="AAW23268.1"
/db_xref="GI:56699144"
/translation="PISPIDTVPVKLKPGMDGPKVKQWPLSREKIEALTAICQEMEQE
GKIXRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPGGLKQ
KQSVTVLDVGDAYFSCPLDPBFRKYTAFTIPSVNNEXPGIRYQYNVLPQGWKGSPAIF
QSSMTKILDPFRKXNPEMEIYQYMDDLYVGSBLPLAEHRKRVELLREHLYQWGFTTPD
KKHQKEPPFQWMGYELHPDKWTVQPIKLPDKXVWTVNDIQKLV"
BASE COUNT 290 a 136 c 152 g 183 t 22 other
ORIGIN
1 cctataagcc ccatagacac agtaccagta aaactgaagc caggaatgga tggaccaaaa
61 gtaaaacaat ggcccctatc tagagaaaaa atagaagcat tgacagcaat atgtcaggaa
121 atggaacaag agggaaarat tkcaagaata ggacctgaaa atccttataa tacacccatt
181 tttgctataa aaaagaaaga tagcactaag tggaggaaat tggtagactt cagagaatta
241 aataaaagaa cacaagattt ctgggaagtg cagttaggta tcccacatcc tgggggttta
301 aaacaaaarc agtctgttac agtyttagat gtaggagatg cttatttctc atgtccttta
361 gayccaract tcagraaata tactgctttc actattccta gtgtraacaa tgagayccca
421 ggaataagat atcagtayaa tgtccttcca caaggatgga arggttcacc agctatattc
481 cagagttcaa tgacaaaaat yctagatcca tttagraaag rcaacccaga aatggaaatt
541 tatcagtaca tggatgattt atatgtagga tcaratttac cmttggcaga gcacagraaa
601 agggttgaat trctaagaga acatttatat cagtggggat tcactacccc tgataaaaag
661 catcagaaag aacctccctt tcagtggatg gggtatgagc tccatccaga caartggaca
721 gtacarccca tcaaattgcc tgacaaggaw gtatggacag taaatgatat acagaartta
781 gta
//
last modified: Tue May 31 10:56 2022