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LOCUS	    AY694425		     783 bp    RNA     linear	VRL 04-JAN-2005
DEFINITION  HIV-1 isolate YBF35 group O from Cameroon reverse transcriptase
	    (pol) gene, partial cds
ACCESSION   AY694425
VERSION     AY694425.1 GI:56699143
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 783)
            Show all sequences for reference 1
  AUTHORS   Tuaillon,E., Gueudin,M., Lemee,V., Gueit,I., Roques,P.,
	    Corrigan,G.E., Plantier,J.C., Simon,F. and Braun,J.
  TITLE     Phenotypic Susceptibility to Nonnucleoside Inhibitors of
	    Virion-Associated Reverse Transcriptase From Different HIV Types
	    and Groups
  JOURNAL   J. Acquir. Immune Defic. Syndr. 37 (5), 1543-1549 (2004)
  PUBMED    15577405
REFERENCE   2 (bases 1 to 783)
            Show all sequences for reference 2
  AUTHORS   Gueudin,M., Braun,J., Plantier,J.-C., Lemee,V., Mauclere,P. and
	    Simon,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2004) Virology, CHU Charles Nicolle, 1 rue de
	    Germont, Rouen 76031 cedex, France
COMMENT     Sampling date was entered in the database based on previous data
	    for these samples.
FEATURES             Location/Qualifiers
     source	     1..783
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="YBF35"
		     /db_xref="taxon:11676"
		     /country="Cameroon"
		     /note="group: O"
     gene	     <1..>783
		     /gene="pol"
     CDS	     <1..>783
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="AAW23268.1"
		     /db_xref="GI:56699144"
		     /translation="PISPIDTVPVKLKPGMDGPKVKQWPLSREKIEALTAICQEMEQE
		     GKIXRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPGGLKQ
		     KQSVTVLDVGDAYFSCPLDPBFRKYTAFTIPSVNNEXPGIRYQYNVLPQGWKGSPAIF
		     QSSMTKILDPFRKXNPEMEIYQYMDDLYVGSBLPLAEHRKRVELLREHLYQWGFTTPD
		     KKHQKEPPFQWMGYELHPDKWTVQPIKLPDKXVWTVNDIQKLV"
BASE COUNT	290 a	 136 c	  152 g    183 t     22 other
ORIGIN
       1 cctataagcc ccatagacac agtaccagta aaactgaagc caggaatgga tggaccaaaa 
      61 gtaaaacaat ggcccctatc tagagaaaaa atagaagcat tgacagcaat atgtcaggaa 
     121 atggaacaag agggaaarat tkcaagaata ggacctgaaa atccttataa tacacccatt 
     181 tttgctataa aaaagaaaga tagcactaag tggaggaaat tggtagactt cagagaatta 
     241 aataaaagaa cacaagattt ctgggaagtg cagttaggta tcccacatcc tgggggttta 
     301 aaacaaaarc agtctgttac agtyttagat gtaggagatg cttatttctc atgtccttta 
     361 gayccaract tcagraaata tactgctttc actattccta gtgtraacaa tgagayccca 
     421 ggaataagat atcagtayaa tgtccttcca caaggatgga arggttcacc agctatattc 
     481 cagagttcaa tgacaaaaat yctagatcca tttagraaag rcaacccaga aatggaaatt 
     541 tatcagtaca tggatgattt atatgtagga tcaratttac cmttggcaga gcacagraaa 
     601 agggttgaat trctaagaga acatttatat cagtggggat tcactacccc tgataaaaag 
     661 catcagaaag aacctccctt tcagtggatg gggtatgagc tccatccaga caartggaca 
     721 gtacarccca tcaaattgcc tgacaaggaw gtatggacag taaatgatat acagaartta 
     781 gta
//
last modified: Tue May 31 10:56 2022


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