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LOCUS AY669756 2532 bp DNA linear VRL 12-NOV-2004
DEFINITION HIV-1 isolate 93UG070 from Uganda envelope glycoprotein (env) gene,
partial cds
ACCESSION AY669756
VERSION AY669756.1 GI:49617664
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2532)
Show all sequences for reference 1
AUTHORS Binley,J.M., Wrin,T., Korber,B., Zwick,M.B., Wang,M., Chappey,C.,
Stiegler,G., Kunert,R., Zolla-Pazner,S., Katinger,H.,
Petropoulos,C.J. and Burton,D.R.
TITLE Comprehensive cross-clade neutralization analysis of a panel of
anti-human immunodeficiency virus type 1 monoclonal antibodies.
JOURNAL J. Virol. 78 (23), 13232-52 (2004)
PUBMED 15542675
REFERENCE 2 (bases 1 to 2532)
Show all sequences for reference 2
AUTHORS Binley,J.M., Wrin,T., Zwick,M.B., Korber,B., Wang,M., Chappey,C.,
Stiegler,G., Kunert,R., Zolla-Pazner,S., Katinger,H.,
Petropoulos,C.J. and Burton,D.R.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2004) Departments of Immunology and Molecular
Biology, The Scripps Research Institute, 10550 North Torrey Pines
Rd., La Jolla, CA 92037, USA
FEATURES Location/Qualifiers
source 1..2532
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="93UG070"
/db_xref="taxon:11676"
/country="Uganda"
/note="genotype: D"
gene 1..2532
/gene="env"
CDS 1..>2532
/gene="env"
/note="gp160"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAT67528.1"
/db_xref="GI:49617665"
/translation="MRVRGIERNYWWRWGTMLLGMLMTCSVAGQLWVTVYYGVPVWKE
ATTTLFCASDAKSHKAEAHNIWATHACVPTDPNPQEXILENVTENFNMWXNNMVEQMH
EDIISLWDQSLKPCVKLTPLCVTLNCTECKNCTEGNNTVGNNTEIGMKNCSFNITTEV
RDKKKQEYALFYKLDVVQMDNTNTSYRLINCNSSTITQACPKVSFEPIPIHYCTPAGF
AILKCNDKKFNGTGPCXNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVIIRSENLTNNA
KIIIXQLNKSVEIRCARPYIKIWRRTHIGSGQAYSTKRIQNYTGPAHCNISGGDWNDT
LKQVAEKLRHLLNKTIIIFKPPSGGDPEITTHSFNCGGEFFYCNTSXLFNHTVFXBGX
TXISTNGTITLPCRIKQIINMWQGVGXAMYAPPIEGLINCTSNITGLLLTRDGGADNX
SQNETIRPGGGDMRDNWRSELYKYKVVRIEPLGLAPTKAKRRVVEREKRAIGLGAVFL
GFLGAAGSTMGAASLTLTVQARQVMSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQA
RVLAVESYLRDQQLLGAWGCSGXHICTTNVPWNSSWSNKSLEQIWENMTWLEWEKEID
NYTGVIYRLIEESQTQQEKNEQDLLKLDQWASLWNWFSITKWLWYIKIFIMIVGGLIG
LRIVFAVLSVVNRVRQGYSPLSFQTLLPVPRGPDRPEGIEEEGGEQGRGRSIRLVNGL
SALIWDDLRNLCLFSYHRLRDLLLIAXRIVELLGRRGWEAIKYLWNIIQYWTQELKNS
AISLLDTTAXXVAEATDRXIEIVQRXFRAVLHIPTRIRQGLERALL"
BASE COUNT 869 a 443 c 590 g 591 t 39 other
ORIGIN
1 atgagagtga gggggataga gaggaattac tggtggagat ggggcaccat gctccttggg
61 atgttgatga catgtagtgt tgcaggacag ttgtgggtca cagtttatta tggggtacct
121 gtgtggaaag aagcaaccac tactctattt tgtgcatcag atgctaaatc acataaagca
181 gaggcacaya atatctgggc tacacatgcc tgtgtaccaa cagaccccaa cccacaagaa
241 rtaataytag aaaatgtcac agaaaacttt aacatgtgga raaataacat ggtggarcag
301 atgcatgagg atataatcag tttatgggat caaagcctaa aaccatgtgt aaarttaacc
361 ccactctgtg tcactttaaa ctgcactgaa tgtaaaaatt gcactgaagg gaacaatact
421 gtagggaaca atactgaaat aggaatgaaa aactgctctt tcaayataac cacagaagta
481 agagataara agaagcaaga atatgcactt ttttataaac ttgatgtggt acaaatggat
541 aatactaata ccagctatag attaataaat tgtaattcct caaccattac acaggcatgt
601 ccaaaggtct cctttgaacc aattcccata cattattgta cyccagctgg atttgcgatt
661 ctaaaatgta atgataagaa gttcaatggg acgggtccat gcaraaatgt cagcacagta
721 cagtgtacac atgggattag gccagtagtg tcaactcaac tgttattgaa tggcagtcta
781 gcagaagaag argtaataat tagatctgaa aatctcacaa ataatgctaa aatcataata
841 gyacagctta ataagtctgt agaaattagg tgcgcaagac cctacataaa aatatggcga
901 aggacacata taggatcggg gcaagcatac tctacaaaaa gaatacaaaa ttatacagga
961 ccagcacatt gtaacattag tggaggtgac tggaatgaca ctttaaaaca ggtagctgaa
1021 aaattaagac accttcttaa caagacaata ataattttta aaccaccctc gggaggggac
1081 ccagaaatta caacacacag ctttaattgt ggaggggaat ttttctactg caatacatca
1141 aractgttta atcatacagt gtttamtrat ggtrgtaccw caattagtac aaatggraca
1201 atcacactcc catgcagaat aaaacaaatt ataaacatgt ggcagggagt agggaragca
1261 atgtatgccc ctcccattga aggactaatc aaytgtacat caaatattac aggactattg
1321 ytracaagag atgggggtgc agataatrct agtcagaatg agaccatcag gcctggagga
1381 ggagatatga gagataattg gagaagtgaa ttatacaaat ataaagtagt aagaattgaa
1441 ccactaggtc tagcacccac caaggcaaag agaagagtgg tggaaagaga aaaaagagca
1501 ataggactgg gagctgtgtt ccttgggttc ttgggagcag caggaagcac gatgggcgca
1561 gcgtcactga cgctgacggt acaggccaga caggtaatgt ctggtatagt gcagcagcaa
1621 aacaatttgc tgcgggctat agaggcgcaa cagcatctrt tgcaactcac agtctggggc
1681 attaaacagc tccaggcaag agtcctggct gtggaaagct acctaaggga tcaacagctc
1741 ctaggagcct ggggttgctc tggaaracac atttgcacca ctaatgtgcc ytggaaytct
1801 agctggagta ayaaatctyt agagcagatt tgggagaaca tgacctggtt rgagtgggaa
1861 aaagaaattg acaattacac aggggtaata tacagattaa ttgaagaatc gcaaacccaa
1921 caagaaaaga atgaacaaga cctattgaaa ttggaccaat gggcaagttt gtggaattgg
1981 tttagyataa caaaatggct gtggtatata aaaatattca taatgatagt aggaggcttg
2041 ataggattaa gaatagtttt tgctgtgctt tctgtagtaa atagagttag gcagggatat
2101 tcacctctgt cattccagac cctcctccca gtgccgaggg gacccgacag gcccgaagga
2161 atagaagaag aaggtggaga gcaaggcaga ggcagatcga ttcgattggt gaacggatta
2221 tccgcactta tctgggacga cctgaggaac ctgtgcctct tcagctacca ccgcttgaga
2281 gacttactct taattgcarc gaggattgtg gaacttctgg gacgcagggg gtgggaagcc
2341 atcaaatatc tgtggaacat catacagtat tggactcagg arttaaagaa tagtgctatt
2401 agcttgcttg ataccacagc artaryagta gctgaggcaa cagatagggy tatagaaata
2461 gtacaaagar yttttagagc tgttcttcac atacccacac gcataagaca gggcttggaa
2521 agggctttac ta
//
last modified: Tue May 31 10:56 2022