HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AY669756		    2532 bp    DNA     linear	VRL 12-NOV-2004
DEFINITION  HIV-1 isolate 93UG070 from Uganda envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   AY669756
VERSION     AY669756.1 GI:49617664
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2532)
            Show all sequences for reference 1
  AUTHORS   Binley,J.M., Wrin,T., Korber,B., Zwick,M.B., Wang,M., Chappey,C.,
	    Stiegler,G., Kunert,R., Zolla-Pazner,S., Katinger,H.,
	    Petropoulos,C.J. and Burton,D.R.
  TITLE     Comprehensive cross-clade neutralization analysis of a panel of
	    anti-human immunodeficiency virus type 1 monoclonal antibodies.
  JOURNAL   J. Virol. 78 (23), 13232-52 (2004)
  PUBMED    15542675
REFERENCE   2 (bases 1 to 2532)
            Show all sequences for reference 2
  AUTHORS   Binley,J.M., Wrin,T., Zwick,M.B., Korber,B., Wang,M., Chappey,C.,
	    Stiegler,G., Kunert,R., Zolla-Pazner,S., Katinger,H.,
	    Petropoulos,C.J. and Burton,D.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2004) Departments of Immunology and Molecular
	    Biology, The Scripps Research Institute, 10550 North Torrey Pines
	    Rd., La Jolla, CA 92037, USA
FEATURES             Location/Qualifiers
     source	     1..2532
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="93UG070"
		     /db_xref="taxon:11676"
		     /country="Uganda"
		     /note="genotype: D"
     gene	     1..2532
		     /gene="env"
     CDS	     1..>2532
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AAT67528.1"
		     /db_xref="GI:49617665"
		     /translation="MRVRGIERNYWWRWGTMLLGMLMTCSVAGQLWVTVYYGVPVWKE
		     ATTTLFCASDAKSHKAEAHNIWATHACVPTDPNPQEXILENVTENFNMWXNNMVEQMH
		     EDIISLWDQSLKPCVKLTPLCVTLNCTECKNCTEGNNTVGNNTEIGMKNCSFNITTEV
		     RDKKKQEYALFYKLDVVQMDNTNTSYRLINCNSSTITQACPKVSFEPIPIHYCTPAGF
		     AILKCNDKKFNGTGPCXNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVIIRSENLTNNA
		     KIIIXQLNKSVEIRCARPYIKIWRRTHIGSGQAYSTKRIQNYTGPAHCNISGGDWNDT
		     LKQVAEKLRHLLNKTIIIFKPPSGGDPEITTHSFNCGGEFFYCNTSXLFNHTVFXBGX
		     TXISTNGTITLPCRIKQIINMWQGVGXAMYAPPIEGLINCTSNITGLLLTRDGGADNX
		     SQNETIRPGGGDMRDNWRSELYKYKVVRIEPLGLAPTKAKRRVVEREKRAIGLGAVFL
		     GFLGAAGSTMGAASLTLTVQARQVMSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQA
		     RVLAVESYLRDQQLLGAWGCSGXHICTTNVPWNSSWSNKSLEQIWENMTWLEWEKEID
		     NYTGVIYRLIEESQTQQEKNEQDLLKLDQWASLWNWFSITKWLWYIKIFIMIVGGLIG
		     LRIVFAVLSVVNRVRQGYSPLSFQTLLPVPRGPDRPEGIEEEGGEQGRGRSIRLVNGL
		     SALIWDDLRNLCLFSYHRLRDLLLIAXRIVELLGRRGWEAIKYLWNIIQYWTQELKNS
		     AISLLDTTAXXVAEATDRXIEIVQRXFRAVLHIPTRIRQGLERALL"
BASE COUNT	869 a	 443 c	  590 g    591 t     39 other
ORIGIN
       1 atgagagtga gggggataga gaggaattac tggtggagat ggggcaccat gctccttggg 
      61 atgttgatga catgtagtgt tgcaggacag ttgtgggtca cagtttatta tggggtacct 
     121 gtgtggaaag aagcaaccac tactctattt tgtgcatcag atgctaaatc acataaagca 
     181 gaggcacaya atatctgggc tacacatgcc tgtgtaccaa cagaccccaa cccacaagaa 
     241 rtaataytag aaaatgtcac agaaaacttt aacatgtgga raaataacat ggtggarcag 
     301 atgcatgagg atataatcag tttatgggat caaagcctaa aaccatgtgt aaarttaacc 
     361 ccactctgtg tcactttaaa ctgcactgaa tgtaaaaatt gcactgaagg gaacaatact 
     421 gtagggaaca atactgaaat aggaatgaaa aactgctctt tcaayataac cacagaagta 
     481 agagataara agaagcaaga atatgcactt ttttataaac ttgatgtggt acaaatggat 
     541 aatactaata ccagctatag attaataaat tgtaattcct caaccattac acaggcatgt 
     601 ccaaaggtct cctttgaacc aattcccata cattattgta cyccagctgg atttgcgatt 
     661 ctaaaatgta atgataagaa gttcaatggg acgggtccat gcaraaatgt cagcacagta 
     721 cagtgtacac atgggattag gccagtagtg tcaactcaac tgttattgaa tggcagtcta 
     781 gcagaagaag argtaataat tagatctgaa aatctcacaa ataatgctaa aatcataata 
     841 gyacagctta ataagtctgt agaaattagg tgcgcaagac cctacataaa aatatggcga 
     901 aggacacata taggatcggg gcaagcatac tctacaaaaa gaatacaaaa ttatacagga 
     961 ccagcacatt gtaacattag tggaggtgac tggaatgaca ctttaaaaca ggtagctgaa 
    1021 aaattaagac accttcttaa caagacaata ataattttta aaccaccctc gggaggggac 
    1081 ccagaaatta caacacacag ctttaattgt ggaggggaat ttttctactg caatacatca 
    1141 aractgttta atcatacagt gtttamtrat ggtrgtaccw caattagtac aaatggraca 
    1201 atcacactcc catgcagaat aaaacaaatt ataaacatgt ggcagggagt agggaragca 
    1261 atgtatgccc ctcccattga aggactaatc aaytgtacat caaatattac aggactattg 
    1321 ytracaagag atgggggtgc agataatrct agtcagaatg agaccatcag gcctggagga 
    1381 ggagatatga gagataattg gagaagtgaa ttatacaaat ataaagtagt aagaattgaa 
    1441 ccactaggtc tagcacccac caaggcaaag agaagagtgg tggaaagaga aaaaagagca 
    1501 ataggactgg gagctgtgtt ccttgggttc ttgggagcag caggaagcac gatgggcgca 
    1561 gcgtcactga cgctgacggt acaggccaga caggtaatgt ctggtatagt gcagcagcaa 
    1621 aacaatttgc tgcgggctat agaggcgcaa cagcatctrt tgcaactcac agtctggggc 
    1681 attaaacagc tccaggcaag agtcctggct gtggaaagct acctaaggga tcaacagctc 
    1741 ctaggagcct ggggttgctc tggaaracac atttgcacca ctaatgtgcc ytggaaytct 
    1801 agctggagta ayaaatctyt agagcagatt tgggagaaca tgacctggtt rgagtgggaa 
    1861 aaagaaattg acaattacac aggggtaata tacagattaa ttgaagaatc gcaaacccaa 
    1921 caagaaaaga atgaacaaga cctattgaaa ttggaccaat gggcaagttt gtggaattgg 
    1981 tttagyataa caaaatggct gtggtatata aaaatattca taatgatagt aggaggcttg 
    2041 ataggattaa gaatagtttt tgctgtgctt tctgtagtaa atagagttag gcagggatat 
    2101 tcacctctgt cattccagac cctcctccca gtgccgaggg gacccgacag gcccgaagga 
    2161 atagaagaag aaggtggaga gcaaggcaga ggcagatcga ttcgattggt gaacggatta 
    2221 tccgcactta tctgggacga cctgaggaac ctgtgcctct tcagctacca ccgcttgaga 
    2281 gacttactct taattgcarc gaggattgtg gaacttctgg gacgcagggg gtgggaagcc 
    2341 atcaaatatc tgtggaacat catacagtat tggactcagg arttaaagaa tagtgctatt 
    2401 agcttgcttg ataccacagc artaryagta gctgaggcaa cagatagggy tatagaaata 
    2461 gtacaaagar yttttagagc tgttcttcac atacccacac gcataagaca gggcttggaa 
    2521 agggctttac ta
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.