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LOCUS AY669720 2574 bp DNA linear VRL 12-NOV-2004
DEFINITION HIV-1 isolate VLGC-B3 from Brazil envelope glycoprotein (env) gene,
partial cds
ACCESSION AY669720
VERSION AY669720.1 GI:49617592
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2574)
Show all sequences for reference 1
AUTHORS Binley,J.M., Wrin,T., Korber,B., Zwick,M.B., Wang,M., Chappey,C.,
Stiegler,G., Kunert,R., Zolla-Pazner,S., Katinger,H.,
Petropoulos,C.J. and Burton,D.R.
TITLE Comprehensive cross-clade neutralization analysis of a panel of
anti-human immunodeficiency virus type 1 monoclonal antibodies.
JOURNAL J. Virol. 78 (23), 13232-52 (2004)
PUBMED 15542675
REFERENCE 2 (bases 1 to 2574)
Show all sequences for reference 2
AUTHORS Binley,J.M., Wrin,T., Zwick,M.B., Korber,B., Wang,M., Chappey,C.,
Stiegler,G., Kunert,R., Zolla-Pazner,S., Katinger,H.,
Petropoulos,C.J. and Burton,D.R.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2004) Departments of Immunology and Molecular
Biology, The Scripps Research Institute, 10550 North Torrey Pines
Rd., La Jolla, CA 92037, USA
FEATURES Location/Qualifiers
source 1..2574
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="VLGC-B3"
/db_xref="taxon:11676"
/country="Brazil"
/note="genotype: B"
gene 1..2574
/gene="env"
CDS 1..>2574
/gene="env"
/note="gp160"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAT67492.1"
/db_xref="GI:49617593"
/translation="MRARGTRKNYXWXWGMMLLGMLMICSATGNLWVTVYYGVPVWKE
XXTTLFCASDAKAVDTEAHNVWATHACVPTDPBPQEVXLENVTENFNMWKNNMVEQMH
EDIIXLWDQSLKPCVKLTPLCVALNCTDLKANSTXXXKANSTSNTNVTVDNNGEIKNC
SFNVTSGIGNKRHKEYALFYKLDVVSIDKBNTSYTLINCNTSVITQACPKVSFEPIPI
HYCAPAGFALLKCNDKKFNGXGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIR
SENFTDNAKTLIVQLNETVEINCTRPNNNTRKSINIGPGRAFYATGXIIGNIRQAHCN
LTRTKWXXTLKRIVGKLREQFKNXTIVFNQSSGGDPEIVMHTFNCGGEFFYCNTAELF
NSTWTXNXTXXSXSXSQGNDTIXLPCRIKQIINRWQEVGKAMYAPPIRGVIRCSSNIT
GLLLTRDGGNGNKSXNEIFRPGGGDMRDNWRSELYKYKVVRIEPLGVAPTKAKRRVVQ
REKRAVGTLGAMFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLXAIEAQQH
MLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNASWSNKSLDSI
WQNMTWMEWEREIDNYTGXIYTLLEESQNQQEKNEKDLLELDXWASLWNWFDISNWLW
YIKIFIMIVGGLVGLRIVFTVLSIVNRARQGYSPLSFQTXFPAPRGPDRPDGIEGEGG
ERDRGXSSRLVHGFLALIWDDLRNLCLFSYHXLRDLLLIVXRIVELLGRRGWEALKYL
WNLLQYWSQELKNSAVSLLNATAIXVAEGTDRVIEVVQRFCRAVLHIPRRIRQGLERA
LL"
BASE COUNT 870 a 429 c 599 g 618 t 58 other
ORIGIN
1 atgagagcga gggggaccag gaagaattac tkgtggarat ggggcatgat gctccttggg
61 atgttaatga tctgtagtgc tacaggaaat ttgtgggtca cagtctatta tggggtgcct
121 gtgtggaaag aarcarccac cactctattt tgtgcatcag atgctaaagc agttgacaca
181 gaggcacata atgtttgggc cacacatgcc tgtgtaccca cagaccctra cccacaggaa
241 gtaakattgg aaaatgtgac agaaaatttt aacatgtgga aaaataayat ggtagaacag
301 atgcatgagg acataatcar tttatgggat caaagcctaa agccatgtgt aaaattaacc
361 ccactttgtg ttgctttaaa ttgcactgat ttgaaggcaa atagcactnn nnnnatkaag
421 gcaaatagca ctagtaatac taatgtcact gtggataata atggggaaat aaaaaactgc
481 tctttcaatg tcacctcagg cataggaaat aagaggcata aagaatatgc acttttttat
541 aaacttgatg tagtatcaat agataagrat aatacaagct atacactgat aaattgtaac
601 acctcagtca ttacacaggc ctgtccaaag gtatcctttg aaccaattcc yatacattat
661 tgtgccccgg ctggttttgc gcttctaaag tgtaatgata agaaattcaa tggaamagga
721 ccatgtacaa atgtcagcac agtgcaatgt actcatggaa ttaggccagt agtgtcaacy
781 caactcctgt taaatggcag tctagcagaa gaagagatag taattagatc tgaaaatttc
841 acrgacaatg ctaaaaccyt aatagtacag ctgaatgaaa ctgtagaaat taattgtaca
901 agacccaaca acaatacaag aaaaagtata aatataggac cggggagagc attctatgca
961 acaggagawa taataggaaa tataagacaa gcwcattgta accttactag aacaaaatgg
1021 raaarcactt taaaaaggat agttggaaaa ttaagagaac aatttaaaaa camaacaata
1081 gtttttaayc aatcctcagg aggggaccca gaaattgtaa tgcayacttt taattgtgga
1141 ggggaatttt tctactgtaa tacagcagag ctgtttaata gtacttggac tnnnaatrgt
1201 actraargat caaaktccmc tagtcaagga aatgacacaa tcayactccc atgcagaata
1261 aaacaaatta taaacagatg gcaggaagtw ggaaaagcaa tgtatgcccc ycccatcaga
1321 ggagtaatta gatgttcatc aaatattaca gggctgctat taacaagaga tggaggkaac
1381 gggaacaagt ctamtaatga gattttyaga cctggaggag gagatatgag ggacaattgg
1441 agaagtgaat tatacaaata taaagtagta agaattgagc cattaggagt agcacccacc
1501 aaggcaaaga gaagagtggt gcagagagaa aaaagagcag tgggaacact aggagctatg
1561 ttccttgggt tcttgggagc agcaggaagc actatgggcg cagcatcagt gacgctgacg
1621 gtacaggcca gacaattatt gtctggtata gtgcaacagc aaaacaattt gctgarggct
1681 attgaggcgc agcagcatat gttgcaactc acagtctggg gcatcaagca gctccaggca
1741 agagtcctgg ctgtggaaag atacctaaga gatcaacagc tcctrgggat ttggggttgc
1801 tctggaaaac tcatctgcac cactgctgta ccttggaatg ctagttggag taataaatct
1861 ctggatagca tttggcagaa catgacctgg atggagtggg agagagaaat tgacaattat
1921 acaggcwtaa tatacacttt acttgaagaa tcgcaaaacc aacaagaaaa raatgaaaar
1981 gatttgttrg aattggatrc atgggcaagt ttgtggaatt ggtttgacat atcaaattgg
2041 ctgtggtata taaaaatatt cataatgata gtagggggct tagtaggttt aagaatagtt
2101 tttactgtgc tttctatagt aaatagagct aggcagggat actcaccatt rtcgttccag
2161 acccrattcc cagctccgag gggaccagac aggcccgacg gaatcgaagg agaaggtgga
2221 gagagagaca gaggcgmatc cagtcgatta gtgcatggat tcttagcact catctgggac
2281 gatctgcgga acctgtgcct cttcagctac caccrcttga gagacttact cttgattgta
2341 rcgaggattg tggaacttct gggrcgcagg gggtgggaag cmctcaaata tctgtggaat
2401 ctcctacagt aytggagtca ggaactaaag aatagtgctg ttagcttgct taatgccaca
2461 gctatarcag tagctgaagg gacagatagg gttatagaag tagtacaaag attttgtaga
2521 gctgttctcc acatacctag aagaataaga cagggcttag aaagggcttt gcta
//
last modified: Tue May 31 10:56 2022