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LOCUS AY669711 2622 bp DNA linear VRL 12-NOV-2004
DEFINITION HIV-1 isolate 5768 from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION AY669711
VERSION AY669711.1 GI:49617574
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2622)
Show all sequences for reference 1
AUTHORS Binley,J.M., Wrin,T., Korber,B., Zwick,M.B., Wang,M., Chappey,C.,
Stiegler,G., Kunert,R., Zolla-Pazner,S., Katinger,H.,
Petropoulos,C.J. and Burton,D.R.
TITLE Comprehensive cross-clade neutralization analysis of a panel of
anti-human immunodeficiency virus type 1 monoclonal antibodies.
JOURNAL J. Virol. 78 (23), 13232-52 (2004)
PUBMED 15542675
REFERENCE 2 (bases 1 to 2622)
Show all sequences for reference 2
AUTHORS Binley,J.M., Wrin,T., Zwick,M.B., Korber,B., Wang,M., Chappey,C.,
Stiegler,G., Kunert,R., Zolla-Pazner,S., Katinger,H.,
Petropoulos,C.J. and Burton,D.R.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2004) Departments of Immunology and Molecular
Biology, The Scripps Research Institute, 10550 North Torrey Pines
Rd., La Jolla, CA 92037, USA
FEATURES Location/Qualifiers
source 1..2622
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="5768"
/db_xref="taxon:11676"
/country="USA"
/note="genotype: B"
gene 1..2622
/gene="env"
CDS 1..>2622
/gene="env"
/note="gp160"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAT67483.1"
/db_xref="GI:49617575"
/translation="MRVKGIKKNYQHWWRWGMMLFGLLMICSAADKLWVTVYYGVPVW
KETTTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNNMVEQ
MHEDIISLWDQSLKPCVRLTPLCVTLNCIDYYGNTTNSNNSSXYGNTTNSNNSSETMM
EKGEIKNCSFNITTRLKDKMQKEYALFYKYDIVPIDNRVGNDTSNATSYRLTSCNTSV
ITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCKNVSTVQCTHGIKPVVSTQ
LLLNGSLAEEEVMIRSENFTDNAKTIIVQLNETVEINCTRPNNNTRKSIHMGPGKVFY
TTGEIIGDIRQAHCNINRAKWNNTLIKIVEKLRVKFNKTISFKQSSGGDPEIEMHSFN
CGGEFFYCNTTQLFNSTWFNNATLNVNSNVTEGSENITLPCRIRQIVNMWQEVGKAMY
APPIQGQIRCSSNITGLLLTRDGGGSNSSNTSEEVFRPGGGNMRDNWRSELYKYKVVK
IEPLGIAPTKAKRRVVQREKRTVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGI
VQQQNNLLRAIQAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTT
AVPWNASWSNKSLNEIWDNMTWMEWEKEIDNYTSLIYTLIEESQNQQEKNEQELLELD
KWASLWNWFSITNWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQTRLP
TPRGPDRPEGIEEEGGERDRDRSGQLVNGFLAIIWVDLRSLCIFSYHRLRDLLLIVAR
VVELLGRRGWEALNYWWNLLQYWSQELKKSAISLLNATAIAVAEGTDRVIEVVQRTCR
AIIHIPRRIRQGLERLLL"
BASE COUNT 932 a 429 c 614 g 644 t 3 other
ORIGIN
1 atgagagtga aggggatcaa gaagaattat cagcactggt ggagatgggg catgatgctc
61 tttgggttat tgatgatctg tagtgctgca gacaaattgt gggtcacagt ctattatggg
121 gtacctgtgt ggaaagaaac aaccaccact ctattttgtg catcagatgc taaagcatat
181 gatacagagg tgcataatgt ttgggccaca catgcctgtg tacccacaga ccccaaccca
241 caagaagtag tattgggaaa tgtgacagaa aattttaaca tgtggaaaaa taacatggta
301 gaacagatgc atgaggatat aatcagttta tgggatcaaa gcctaaagcc atgtgtaaga
361 ctaaccccac tctgtgttac tttaaattgc attgattatt atggaaatac tactaatagc
421 aataatagta gtnnntatgg aaatactact aatagcaata atagtagtga gacaatgatg
481 gaaaaaggag aaataaaaaa ttgctctttc aatatcacca caagactaaa agataagatg
541 cagaaagaat atgcactttt ttataaatat gatatagtac caatagataa tagggtagga
601 aatgatacca gtaatgctac cagctatagg ttaacaagtt gtaacacctc agtcattacc
661 caggcctgtc caaaggtatc ctttgagcca attcccatac attattgtgc cccggctggt
721 tttgcgattc taaagtgtaa tgataagaag ttcaatggaa caggaccctg taaaaatgtc
781 agcacagtac aatgtacaca tggaattaag ccagtagtat caactcaact gctgttaaat
841 ggcagtctag cagaagaaga ggtaatgatt agatctgaaa atttcacaga caatgctaaa
901 accataatag tacagctgaa tgaaactgta gaaattaatt gtacaagacc caacaataat
961 acaagaaaaa gtatacatat gggaccaggg aaagtatttt acacaacagg agaaataata
1021 ggagatataa gacaagcaca ttgtaacatt aatagagcaa aatggaataa cactttaata
1081 aagatagttg aaaaattaag agtaaaattt aataaaacaa taagctttaa gcaatcctca
1141 ggaggggacc cagaaattga aatgcacagt tttaattgtg gaggggaatt tttctactgt
1201 aatacaacac aactgtttaa tagtacttgg tttaataatg ctactttgaa tgttaatagt
1261 aatgttactg aagggtcaga aaatatcaca ctcccatgca gaataagaca aattgtgaac
1321 atgtggcaag aagtaggaaa agcaatgtat gcccctccca tccaagggca aattagatgt
1381 tcatcaaata ttacagggct gctattaaca agagatggtg gtggtagtaa cagtagtaac
1441 acgagcgagg aggtcttcag acctggagga ggaaatatga gggacaattg gagaagtgaa
1501 ttatataaat ataaagtagt aaaaattgaa ccattaggaa tagcacccac caaggcaaag
1561 agaagagtgg tgcagagaga aaaaaggaca gtgggaatag gagctttgtt ccttgggttc
1621 ttgggagcag caggaagcac tatgggcgca gcgtcaatga cgctgacggt acaggccaga
1681 caattactgt ctggtatagt gcaacagcag aacaatctgc tgagggctat tcaggcgcaa
1741 cagcatctgt tgcagctcac agtctggggc attaaacagc tccaggcaag agtcctagct
1801 gtggaaagat acctaaagga tcaacagctc ctggggattt ggggttgctc tggaaaactc
1861 atctgcacca ctgctgtgcc ttggaatgct agttggagta ataaatctct gaatgaaatt
1921 tgggataaca tgacctggat ggagtgggaa aaagaaattg acaattacac aagcttaata
1981 tacaccttaa ttgaagaatc gcaaaaccaa caagaaaaga atgaacaaga attattggaa
2041 ttagataaat gggcaagttt gtggaattgg tttagcataa caaactggct gtggtatata
2101 aaaatattta taatgatagt aggaggcttg ataggtttaa gaatagtttt tgctgtgctt
2161 tctatagtga acagagttag gcagggatac tcaccactat cgtttcagac ccgcctccca
2221 accccgaggg gacccgacag gcccgaagga atcgaagaag aaggtggaga gagagacaga
2281 gacagatcag gacaattagt gaatggattc ttagcaatca tctgggtcga tctgcggagc
2341 ctgtgcatct tcagctacca ccgcttgaga gacttactct tgattgtagc gagggttgtg
2401 gaacttctgg gacgcagggg gtgggaagcc ctcaactatt ggtggaatct cctacagtat
2461 tggagtcagg aactaaagaa gagtgccatt agcttgctca atgcaacagc catagcagta
2521 gctgagggga cagatagagt tatagaagta gtacaaagaa cttgtagagc tattatccac
2581 atacctagaa gaataagaca gggcttggaa aggcttttgc ta
//
last modified: Tue May 31 10:56 2022