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LOCUS	    AY605620		     675 bp    RNA     linear	VRL 30-APR-2005
DEFINITION  HIV-1 isolate TH217_RT from Thailand pol protein (pol) gene,
	    partial cds
ACCESSION   AY605620
VERSION     AY605620.1 GI:51342862
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 675)
            Show all sequences for reference 1
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     RT and protease sequences from HIV-1 non-B infected persons from
	    Thailand
  JOURNAL   Unpublished
REFERENCE   2 (bases 1 to 675)
            Show all sequences for reference 2
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-APR-2004) Division of Allergy and Clinical
	    Immunology, Department of Medicine, Faculty of Medicine,
	    Chulalongkorn University, Rama IV Road, Bangkok 10330, Thailand
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Kantor,R., Katzenstein,D.A., Efron,B., Carvalho,A.P., Wynhoven,B.,
	    Cane,P., Clarke,J., Sirivichayakul,S., Soares,M.A., Snoeck,J.,
	    Pillay,C., Rudich,H., Rodrigues,R., Holguin,A., Ariyoshi,K.,
	    Bouzas,M.B., Cahn,P., Sugiura,W., Soriano,V., Brigido,L.F.,
	    Grossman,Z., Morris,L., Vandamme,A.M., Tanuri,A., Phanuphak,P.,
	    Weber,J.N., Pillay,D., Harrigan,P.R., Camacho,R., Schapiro,J.M. and
	    Shafer,R.W.
  TITLE     Impact of HIV-1 Subtype and Antiretroviral Therapy on Protease and
	    Reverse Transcriptase Genotype: Results of a Global Collaboration
  JOURNAL   PLoS Med 2 (4), E112 (2005)
  PUBMED    15839752
COMMENT     Subtype assigned by HIV database staff [JM 5/07].
FEATURES             Location/Qualifiers
     source	     1..675
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="TH217_RT"
		     /db_xref="taxon:11676"
		     /country="Thailand"
     gene	     <1..>675
		     /gene="pol"
     CDS	     <1..>675
		     /gene="pol"
		     /note="encodes reverse transcriptase and protease"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAU01476.1"
		     /db_xref="GI:51342863"
		     /translation="WPLTEEKIKALTEICKELEEEGKISKIGPENPYNTPIFAIKKKE
		     GTKWRKLVDFRELNKRTQDFCEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFR
		     KYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVIYQY
		     MDDLYVGSDLEIGQHRTKIEELRAHLLSWGFFTPDKKHQKEPPFLWMGYELHPDRWTV
		     QPIELPE"
BASE COUNT	263 a	 114 c	  143 g    155 t
ORIGIN
       1 tggccattga cagaagagaa aataaaagca ttaacagaaa tttgtaaaga attggaagag 
      61 gaaggaaaga tttcaaaaat tgggcctgaa aatccataca atactccaat atttgctata 
     121 aagaaaaagg aaggcactaa atggaggaaa ttagtagatt tcagagagct caataaaaga 
     181 actcaggact tttgtgaagt tcaattagga ataccgcatc cagcaggttt aaaaaagaaa 
     241 aaatcagtaa cagtactaga tgtgggagat gcatattttt cagttcctct agatgagagc 
     301 tttagaaagt atactgcatt caccatacct agtataaaca atgagacacc aggaatcaga 
     361 tatcagtaca atgtgctgcc acagggatgg aaaggatcac cggcaatatt ccagagtagc 
     421 atgacaaaaa tcttagagcc ctttagagca aaaaatccag aaatagttat ctatcaatac 
     481 atggatgact tgtatgtagg atctgactta gaaatagggc agcacagaac aaagatagag 
     541 gagctaagag ctcatctact gagctgggga ttttttacac cagacaaaaa gcatcagaag 
     601 gaacctccat tcctttggat gggatatgaa ctccatcctg acagatggac agtccagcct 
     661 atagaactgc cagaa
//
last modified: Tue May 31 10:56 2022


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