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LOCUS	    AY605615		     702 bp    RNA     linear	VRL 30-APR-2005
DEFINITION  HIV-1 isolate TH212_RT from Thailand pol protein (pol) gene,
	    partial cds
ACCESSION   AY605615
VERSION     AY605615.1 GI:51342852
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 702)
            Show all sequences for reference 1
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     RT and protease sequences from HIV-1 non-B infected persons from
	    Thailand
  JOURNAL   Unpublished
REFERENCE   2 (bases 1 to 702)
            Show all sequences for reference 2
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-APR-2004) Division of Allergy and Clinical
	    Immunology, Department of Medicine, Faculty of Medicine,
	    Chulalongkorn University, Rama IV Road, Bangkok 10330, Thailand
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Kantor,R., Katzenstein,D.A., Efron,B., Carvalho,A.P., Wynhoven,B.,
	    Cane,P., Clarke,J., Sirivichayakul,S., Soares,M.A., Snoeck,J.,
	    Pillay,C., Rudich,H., Rodrigues,R., Holguin,A., Ariyoshi,K.,
	    Bouzas,M.B., Cahn,P., Sugiura,W., Soriano,V., Brigido,L.F.,
	    Grossman,Z., Morris,L., Vandamme,A.M., Tanuri,A., Phanuphak,P.,
	    Weber,J.N., Pillay,D., Harrigan,P.R., Camacho,R., Schapiro,J.M. and
	    Shafer,R.W.
  TITLE     Impact of HIV-1 Subtype and Antiretroviral Therapy on Protease and
	    Reverse Transcriptase Genotype: Results of a Global Collaboration
  JOURNAL   PLoS Med 2 (4), E112 (2005)
  PUBMED    15839752
COMMENT     Subtype assigned by HIV database staff [JM 5/07].
FEATURES             Location/Qualifiers
     source	     1..702
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="TH212_RT"
		     /db_xref="taxon:11676"
		     /country="Thailand"
     gene	     <1..>702
		     /gene="pol"
     CDS	     <1..>702
		     /gene="pol"
		     /note="encodes reverse transcriptase and protease"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAU01471.1"
		     /db_xref="GI:51342853"
		     /translation="TVALTEEKIKALTEICKELEEEGKISKIGPENPYNTPIFAIKKK
		     NSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLDESF
		     RKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPEMVIYQ
		     YMDDLYVGSDLEIGQHRTKIEELRAHLWGWGFYTPDKKHQKEPPFLWMGYELHPDRWT
		     VQPIELPEKDSWTVND"
BASE COUNT	282 a	 118 c	  145 g    157 t
ORIGIN
       1 acagtggcct tgacagaaga aaaaataaaa gcattaacag aaatttgtaa agagctggaa 
      61 gaggaaggaa aaatctcaaa aattgggcct gaaaatccat acaatactcc aatatttgct 
     121 ataaagaaaa agaacagcac caaatggagg aaattagtag atttcagaga gctcaataaa 
     181 agaactcaag atttttggga agttcaatta ggaataccac atccagcagg tttaaaaaag 
     241 aaaaaatcag taacagtact agatgtggga gatgcatatt tttcaattcc attagatgaa 
     301 agctttagaa agtatactgc attcaccata cctagtacaa acaatgagac accaggaatc 
     361 agatatcagt acaatgtgct gccacaaggg tggaaaggat caccggcaat attccagagt 
     421 agcatgacaa aaattttaga gccctttaga ataaaaaatc cagaaatggt tatctatcaa 
     481 tacatggatg acttgtatgt agggtctgat ctagaaatag ggcagcacag aacaaaaata 
     541 gaagagttaa gagctcatct atggggctgg ggattttata caccagacaa aaagcatcag 
     601 aaggaacctc cattcctatg gatgggatat gaactccatc ctgacagatg gacagtccag 
     661 cctatagaac tgccagaaaa agacagctgg actgtcaatg at
//
last modified: Tue May 31 10:56 2022


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