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LOCUS	    AY605571		     711 bp    RNA     linear	VRL 30-APR-2005
DEFINITION  HIV-1 isolate TH158_RT from Thailand pol protein (pol) gene,
	    partial cds
ACCESSION   AY605571
VERSION     AY605571.1 GI:51342764
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 711)
            Show all sequences for reference 1
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     RT and protease sequences from HIV-1 non-B infected persons from
	    Thailand
  JOURNAL   Unpublished
REFERENCE   2 (bases 1 to 711)
            Show all sequences for reference 2
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-APR-2004) Division of Allergy and Clinical
	    Immunology, Department of Medicine, Faculty of Medicine,
	    Chulalongkorn University, Rama IV Road, Bangkok 10330, Thailand
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Kantor,R., Katzenstein,D.A., Efron,B., Carvalho,A.P., Wynhoven,B.,
	    Cane,P., Clarke,J., Sirivichayakul,S., Soares,M.A., Snoeck,J.,
	    Pillay,C., Rudich,H., Rodrigues,R., Holguin,A., Ariyoshi,K.,
	    Bouzas,M.B., Cahn,P., Sugiura,W., Soriano,V., Brigido,L.F.,
	    Grossman,Z., Morris,L., Vandamme,A.M., Tanuri,A., Phanuphak,P.,
	    Weber,J.N., Pillay,D., Harrigan,P.R., Camacho,R., Schapiro,J.M. and
	    Shafer,R.W.
  TITLE     Impact of HIV-1 Subtype and Antiretroviral Therapy on Protease and
	    Reverse Transcriptase Genotype: Results of a Global Collaboration
  JOURNAL   PLoS Med 2 (4), E112 (2005)
  PUBMED    15839752
COMMENT     Subtype assigned by HIV database staff [JM 5/07].
FEATURES             Location/Qualifiers
     source	     1..711
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="TH158_RT"
		     /db_xref="taxon:11676"
		     /country="Thailand"
     gene	     <1..>711
		     /gene="pol"
     CDS	     <1..>711
		     /gene="pol"
		     /note="encodes reverse transcriptase and protease"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAU01427.1"
		     /db_xref="GI:51342765"
		     /translation="QVKQWPLTEEKIKALTEICKDMEEEGKISKIGPENPYNTPVFAI
		     KKKDSTKWRKLIDLRELNKRTQDFCEVQLGIPHPAGLKKKKSVTVLDVGDAFYSVPLD
		     ESFRKYTAFTIPSITNETPGIRYQYNVLPMGWKGSPAIFQSSMTKILEPFRIKNPEII
		     IYQYMDDLYVGSDLEIGQHRTKVEELRAHLLSWGFTTPDEKHQKEPPFLWMGYELHPD
		     RWTVQPIELPEKDSWTVND"
BASE COUNT	278 a	 120 c	  149 g    163 t      1 other
ORIGIN
       1 caggttaaac agtggccatt gacagaagaa aaaataaaag cattaacaga aatttgtaaa 
      61 gatatggaag aggaaggaaa aatctcaaaa attgggcctg aaaatccata caatactcca 
     121 gtatttgcta taaagaaaaa ggacagcacc aaatggagga aattaataga tctcagagag 
     181 ctcaataaaa gaactcagga cttttgtgaa gttcaattag gaataccgca tccagcaggt 
     241 ttaaaaaaga aaaaatcagt aacagtactg gatgtgggag atgcatttta ttcagttcct 
     301 ttagatgaaa gctttagaaa gtatactgca ttcaccatac ctagtataac caatgagaca 
     361 ccaggaatca gatatcagta caatgtgctg ccaatggggt ggaaaggatc accggcaata 
     421 tttcaaagta gcatgacaaa aatcttagag ccctttagaa taaaaaatcc agaaataatt 
     481 atctatcaat ayatggatga cttgtatgta ggatctgatt tagaaatagg gcagcacaga 
     541 acaaaagtag aggagctaag agctcatctg ttgagctggg gatttactac accagacgaa 
     601 aagcatcaga aggaacctcc cttcctttgg atgggatatg aactccatcc tgacagatgg 
     661 acagtccagc ctatagaact gccagaaaaa gacagctgga ctgtcaatga t
//
last modified: Tue May 31 10:56 2022


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