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LOCUS	    AY605556		     702 bp    RNA     linear	VRL 30-APR-2005
DEFINITION  HIV-1 isolate TH143_RT from Thailand pol protein (pol) gene,
	    partial cds
ACCESSION   AY605556
VERSION     AY605556.1 GI:51342734
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 702)
            Show all sequences for reference 1
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     RT and protease sequences from HIV-1 non-B infected persons from
	    Thailand
  JOURNAL   Unpublished
REFERENCE   2 (bases 1 to 702)
            Show all sequences for reference 2
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-APR-2004) Division of Allergy and Clinical
	    Immunology, Department of Medicine, Faculty of Medicine,
	    Chulalongkorn University, Rama IV Road, Bangkok 10330, Thailand
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Kantor,R., Katzenstein,D.A., Efron,B., Carvalho,A.P., Wynhoven,B.,
	    Cane,P., Clarke,J., Sirivichayakul,S., Soares,M.A., Snoeck,J.,
	    Pillay,C., Rudich,H., Rodrigues,R., Holguin,A., Ariyoshi,K.,
	    Bouzas,M.B., Cahn,P., Sugiura,W., Soriano,V., Brigido,L.F.,
	    Grossman,Z., Morris,L., Vandamme,A.M., Tanuri,A., Phanuphak,P.,
	    Weber,J.N., Pillay,D., Harrigan,P.R., Camacho,R., Schapiro,J.M. and
	    Shafer,R.W.
  TITLE     Impact of HIV-1 Subtype and Antiretroviral Therapy on Protease and
	    Reverse Transcriptase Genotype: Results of a Global Collaboration
  JOURNAL   PLoS Med 2 (4), E112 (2005)
  PUBMED    15839752
COMMENT     Subtype assigned by HIV database staff [JM 5/07].
FEATURES             Location/Qualifiers
     source	     1..702
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="TH143_RT"
		     /db_xref="taxon:11676"
		     /country="Thailand"
     gene	     <1..>702
		     /gene="pol"
     CDS	     <1..>702
		     /gene="pol"
		     /note="encodes reverse transcriptase and protease"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAU01412.1"
		     /db_xref="GI:51342735"
		     /translation="PKVKQWPLTEEKIKALTEICKELEEEGKISKIGPENPYNTPIFA
		     IKKKNSAKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPL
		     DESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPEI
		     VIYQYMDDLYVGSDLEIGQHRTKVEELRAHLWSWGFYTPDKKHQKEPPFLWMGYELHP
		     DKWTVQPVELPEEDSW"
BASE COUNT	280 a	 116 c	  147 g    159 t
ORIGIN
       1 ccaaaagtta aacagtggcc attgacagaa gaaaaaataa aagcattaac agaaatttgt 
      61 aaagagttgg aagaggaagg aaaaatctca aaaattgggc ctgaaaatcc atacaatact 
     121 ccaatatttg ctataaagaa aaagaacagt gccaaatgga ggaaattagt agatttcaga 
     181 gagcttaata aaagaactca ggatttttgg gaggttcaat taggaatacc gcatccagca 
     241 ggtttaaaaa agaaaaaatc agtaacagta ctagatgtgg gagatgcata tttttcaatt 
     301 cctttagatg aaagctttag aaagtatact gcattcacca tacctagtac aaacaatgag 
     361 acaccaggaa tcagatatca atacaatgtg ctgccacagg gatggaaagg atcaccagca 
     421 atattccaga gtagcatgac aaaaatctta gagcccttta gaataaaaaa tccagaaata 
     481 gttatctatc aatacatgga tgacttgtat gtaggatctg atttagaaat agggcagcac 
     541 agaacaaaag tagaggagct aagagctcat ctatggagct gggggtttta tacaccagac 
     601 aaaaagcatc agaaggaacc tccattcctt tggatgggat atgaactcca tcctgacaaa 
     661 tggacagtcc agcctgtaga actgccagaa gaagacagct gg
//
last modified: Tue May 31 10:56 2022


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