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LOCUS	    AY605555		     702 bp    RNA     linear	VRL 30-APR-2005
DEFINITION  HIV-1 isolate TH142_RT from Thailand pol protein (pol) gene,
	    partial cds
ACCESSION   AY605555
VERSION     AY605555.1 GI:51342732
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 702)
            Show all sequences for reference 1
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     RT and protease sequences from HIV-1 non-B infected persons from
	    Thailand
  JOURNAL   Unpublished
REFERENCE   2 (bases 1 to 702)
            Show all sequences for reference 2
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-APR-2004) Division of Allergy and Clinical
	    Immunology, Department of Medicine, Faculty of Medicine,
	    Chulalongkorn University, Rama IV Road, Bangkok 10330, Thailand
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Kantor,R., Katzenstein,D.A., Efron,B., Carvalho,A.P., Wynhoven,B.,
	    Cane,P., Clarke,J., Sirivichayakul,S., Soares,M.A., Snoeck,J.,
	    Pillay,C., Rudich,H., Rodrigues,R., Holguin,A., Ariyoshi,K.,
	    Bouzas,M.B., Cahn,P., Sugiura,W., Soriano,V., Brigido,L.F.,
	    Grossman,Z., Morris,L., Vandamme,A.M., Tanuri,A., Phanuphak,P.,
	    Weber,J.N., Pillay,D., Harrigan,P.R., Camacho,R., Schapiro,J.M. and
	    Shafer,R.W.
  TITLE     Impact of HIV-1 Subtype and Antiretroviral Therapy on Protease and
	    Reverse Transcriptase Genotype: Results of a Global Collaboration
  JOURNAL   PLoS Med 2 (4), E112 (2005)
  PUBMED    15839752
COMMENT     Subtype assigned by HIV database staff [JM 5/07].
FEATURES             Location/Qualifiers
     source	     1..702
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="TH142_RT"
		     /db_xref="taxon:11676"
		     /country="Thailand"
     gene	     <1..>702
		     /gene="pol"
     CDS	     <1..>702
		     /gene="pol"
		     /note="encodes reverse transcriptase and protease"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAU01411.1"
		     /db_xref="GI:51342733"
		     /translation="PKVKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPVFA
		     IKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
		     DESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPEM
		     VIYQYMDDLYVGNDLAIGQHRRKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHP
		     DKWTVQPIELPEKDSW"
BASE COUNT	280 a	 123 c	  146 g    153 t
ORIGIN
       1 cccaaggtta aacagtggcc attgacagaa gaaaaaataa aagcattaac agaaatttgt 
      61 aaagagatgg aagaggaagg aaaaatctca aaaattgggc ctgaaaatcc atacaatact 
     121 ccagtatttg ctataaagaa aaaggacagc accaaatgga ggaaattagt agatttcaga 
     181 gagctcaata aaagaactca ggacttttgg gaagttcaat taggaatacc gcatcccgca 
     241 ggtttaaaaa agaaaaaatc agtaacagta ctagatgtgg gagatgcata tttttcagtt 
     301 cctttagatg aaagctttag aaaatatact gcattcacca tacctagtat aaacaatgag 
     361 accccaggaa tcagatatca gtacaacgtg ctgccacagg gatggaaagg atcaccagca 
     421 atattccaaa gtagcatgac aaaaatctta gagcccttta gaataaaaaa tccagaaatg 
     481 gttatctatc aatacatgga tgacttgtat gtaggaaatg atttagcaat aggccagcac 
     541 agaagaaaaa tagaggagct gagagctcat ctattgagct ggggatttac tacaccagac 
     601 aaaaaacatc agaaggagcc tccattcctg tggatgggat atgaactcca tcctgacaaa 
     661 tggacagtcc agcctataga actgccagaa aaagacagct gg
//
last modified: Tue May 31 10:56 2022


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