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LOCUS AY535580 387 bp DNA linear VRL 17-AUG-2005
DEFINITION HIV-1 isolate k4 from Estonia envelope glycoprotein (env) gene,
partial cds
ACCESSION AY535580
VERSION AY535580.1 GI:46242995
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 387)
Show all sequences for reference 1
AUTHORS Adojaan,M., Kivisild,T., Mannik,A., Krispin,T., Ustina,V.,
Zilmer,K., Liebert,E., Jaroslavtsev,N., Priimagi,L., Tefanova,V.,
Schmidt,J., Krohn,K., Villems,R., Salminen,M. and Ustav,M.
TITLE Predominance of a Rare Type of HIV-1 in Estonia
JOURNAL J. Acquir. Immune Defic. Syndr. 39 (5), 598-605 (2005)
PUBMED 16044014
REFERENCE 2 (bases 1 to 387)
Show all sequences for reference 2
AUTHORS Adojaan,M., Kivisild,T., Mannik,A., Krispin,T., Ustina,V.,
Zilmer,K., Liebert,E., Jaroslavtsev,N., Priimagi,L., Tefanova,V.,
Schmidt,J., Krohn,K., Villems,R., Salminen,M. and Ustav,M.
TITLE Direct Submission
JOURNAL Submitted (30-JAN-2004) FIT Biotech OYj Plc Eesti Filiaal, Nooruse
9, Tartu 50411, Estonia
FEATURES Location/Qualifiers
source 1..387
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="k4"
/isolation_source="peripheral blood mononuclear cells"
/db_xref="taxon:11676"
/country="Estonia"
/note="subtype: CRF06-cpx; group: M"
gene <1..>387
/gene="env"
CDS <1..>387
/gene="env"
/note="gp41"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAS83602.1"
/db_xref="GI:46242996"
/translation="SNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYVKDQQLLGIW
GCTGKLICPTNVPWNDSWSNKTFEEIWNNMTWIEWEREINNYTSHIYTLIEESQNQQE
KNEQELLALDKWASLWNWFDISNWLW"
BASE COUNT 137 a 66 c 93 g 91 t
ORIGIN
1 aagcaatttg ctgagagcta tagaggcgca acagcatttg ttgcaactca cagtctgggg
61 cattaaacag ctccaggcaa gagtcctggc gttggagaga tacgtaaagg atcaacagct
121 cctaggaatt tggggatgca ctggaaaact catctgcccc actaatgtgc cctggaatga
181 tagttggagt aataaaactt ttgaagaaat ttggaataac atgacctgga tagaatggga
241 aagagaaatt aacaattaca catcacatat atacacccta attgaagaat cgcaaaatca
301 gcaggaaaag aatgaacaag aattactagc attggacaag tgggcaagtt tgtggaattg
361 gtttgacata tcaaactggc tgtggta
//
last modified: Tue May 31 10:56 2022