View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS AY535532 387 bp DNA linear VRL 17-AUG-2005
DEFINITION HIV-1 isolate 019 from Estonia envelope glycoprotein (env) gene,
partial cds
ACCESSION AY535532
VERSION AY535532.1 GI:46242899
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 387)
Show all sequences for reference 1
AUTHORS Adojaan,M., Kivisild,T., Mannik,A., Krispin,T., Ustina,V.,
Zilmer,K., Liebert,E., Jaroslavtsev,N., Priimagi,L., Tefanova,V.,
Schmidt,J., Krohn,K., Villems,R., Salminen,M. and Ustav,M.
TITLE Predominance of a Rare Type of HIV-1 in Estonia
JOURNAL J. Acquir. Immune Defic. Syndr. 39 (5), 598-605 (2005)
PUBMED 16044014
REFERENCE 2 (bases 1 to 387)
Show all sequences for reference 2
AUTHORS Adojaan,M., Kivisild,T., Mannik,A., Krispin,T., Ustina,V.,
Zilmer,K., Liebert,E., Jaroslavtsev,N., Priimagi,L., Tefanova,V.,
Schmidt,J., Krohn,K., Villems,R., Salminen,M. and Ustav,M.
TITLE Direct Submission
JOURNAL Submitted (30-JAN-2004) FIT Biotech OYj Plc Eesti Filiaal, Nooruse
9, Tartu 50411, Estonia
FEATURES Location/Qualifiers
source 1..387
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="019"
/isolation_source="peripheral blood mononuclear cells"
/db_xref="taxon:11676"
/country="Estonia"
/note="subtype: CRF06-cpx; group: M"
gene <1..>387
/gene="env"
CDS <1..>387
/gene="env"
/note="gp41"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAS83554.1"
/db_xref="GI:46242900"
/translation="SNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYVKDQQLLGIW
GCTGKLICPTNVPWNDSWSNKTFEEIWNNMTWIEWEREINNYTSQIYTLIEESQNQQQ
KNEQELLALDKWASLWNWFDISNWLW"
BASE COUNT 137 a 67 c 92 g 91 t
ORIGIN
1 aagcaatttg ctgagagcta tagaggcgca acagcatttg ttgcaactca cagtctgggg
61 cattaaacag ctccaggcaa gagtcctggc gttggagaga tacgtaaagg atcaacagct
121 cctaggaatt tggggatgca ctggaaaact catctgcccc actaatgtgc cctggaatga
181 tagttggagt aataaaactt ttgaagaaat ttggaataac atgacctgga tagaatggga
241 aagagaaatt aacaattaca catcacaaat atacacccta attgaagaat cgcaaaatca
301 gcagcaaaag aatgaacaag aattactagc attggacaag tgggcaagtt tgtggaattg
361 gtttgacata tctaactggc tgtggta
//
last modified: Tue May 31 10:56 2022