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LOCUS AY489801 398 bp RNA linear VRL 14-FEB-2005
DEFINITION HIV-1 isolate 99CM-SH0164 from Cameroon envelope glycoprotein (env)
gene, partial cds
ACCESSION AY489801
VERSION AY489801.1 GI:45643873
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 398)
Show all sequences for reference 1
AUTHORS Yamaguchi,J., Bodelle,P., Vallari,A.S., Coffey,R., McArthur,C.P.,
Schochetman,G., Devare,S.G. and Brennan,C.A.
TITLE HIV infections in northwestern Cameroon: identification of HIV type
1 group O and dual HIV type 1 group M and group O infections
JOURNAL AIDS Res. Hum. Retroviruses 20 (9), 944-957 (2004)
PUBMED 15585082
REFERENCE 2 (bases 1 to 398)
Show all sequences for reference 2
AUTHORS Yamaguchi,J., Bodelle,P., Vallari,A.S., Coffey,R., McArthur,C.P.,
Devare,S.G. and Brennan,C.A.
TITLE Direct Submission
JOURNAL Submitted (28-NOV-2003) Abbott Laboratories, 100 Abbott Park Rd.,
Abbott Park, IL 60064-6015, USA
FEATURES Location/Qualifiers
source 1..398
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="99CM-SH0164"
/db_xref="taxon:11676"
/country="Cameroon"
/note="serogroup: M"
gene <1..>398
/gene="env"
CDS <1..>398
/gene="env"
/note="gp41; IDR"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAS72622.1"
/db_xref="GI:45643874"
/translation="NNLLKAIEAQQHLLKLTVWGIKQLQARVLALERYLVDQQLLGIW
GCSGKIICTTNVPWNYSWSNRTYDDIWDNMTWLQWDKEVSNYTHIIYDLLEKSQNQQE
KNEQELLALDKWANLWNWFDITKWLWYIKI"
BASE COUNT 142 a 68 c 91 g 96 t 1 other
ORIGIN
1 gaacaatttg ctgaaggcta tagaggctca acaacatctg ttgaaactca cggtctgggg
61 cattaaacag ctccaggcaa gagtcctggc tctggaaaga tacctagtgg atcagcagct
121 cctaggaatt tggggytgct ctggaaaaat catctgcacc actaatgtac cctggaacta
181 tagttggagc aatagaactt atgatgacat atgggataac atgacctggc tgcaatggga
241 taaagaagtt agtaattaca cacacataat atatgatcta cttgaaaaat cgcaaaacca
301 gcaggaaaag aatgaacaag aattattggc attggacaag tgggcaaatc tgtggaattg
361 gtttgacata acaaaatggc tatggtatat aaaaatat
//
last modified: Tue May 31 10:56 2022