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LOCUS AY489788 398 bp RNA linear VRL 14-FEB-2005
DEFINITION HIV-1 isolate 98CM-AT268 from Cameroon envelope glycoprotein (env)
gene, partial cds
ACCESSION AY489788
VERSION AY489788.1 GI:45643847
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 398)
Show all sequences for reference 1
AUTHORS Yamaguchi,J., Bodelle,P., Vallari,A.S., Coffey,R., McArthur,C.P.,
Schochetman,G., Devare,S.G. and Brennan,C.A.
TITLE HIV infections in northwestern Cameroon: identification of HIV type
1 group O and dual HIV type 1 group M and group O infections
JOURNAL AIDS Res. Hum. Retroviruses 20 (9), 944-957 (2004)
PUBMED 15585082
REFERENCE 2 (bases 1 to 398)
Show all sequences for reference 2
AUTHORS Yamaguchi,J., Bodelle,P., Vallari,A.S., Coffey,R., McArthur,C.P.,
Devare,S.G. and Brennan,C.A.
TITLE Direct Submission
JOURNAL Submitted (28-NOV-2003) Abbott Laboratories, 100 Abbott Park Rd.,
Abbott Park, IL 60064-6015, USA
FEATURES Location/Qualifiers
source 1..398
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="98CM-AT268"
/db_xref="taxon:11676"
/country="Cameroon"
/note="serogroup: M"
gene <1..>398
/gene="env"
CDS <1..>398
/gene="env"
/note="gp41; IDR"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAS72609.1"
/db_xref="GI:45643848"
/translation="SNLLRAIEAQQHLLKLTVWGIKQLQARVLALERYLRDQQLLGIW
GCSGKLICTTTVPWNSSWSNKTYNDIWDNMTWLQWDREISNYTETIYRLIEESQNQQE
KNEQDLLALDKWASLWNWFDISNWLWYIKI"
BASE COUNT 137 a 74 c 94 g 92 t 1 other
ORIGIN
1 gagcaatctg ctgagggcta tagaggctca acaacacctg ttgaaactca cggtctgggg
61 cattaaacaa ctccaggcaa gagtcctggc tctagaaaga tacctaaggg atcaacagct
121 cctaggaatt tggggctgct ctggaaaact catctgcacc actactgtgc cctggaactc
181 tagttggagt aataaaactt ataatgacat atgggataac atgacctggc tgcaatggga
241 tagagaaatt agcaattaca cagagacaat atataggcta attgaagaat cgcagaacca
301 gcaggaaaag aatgaacaag acttattrgc attggacaag tgggcaagtc tgtggaattg
361 gtttgacata tcaaactggc tatggtatat aaaaatat
//
last modified: Tue May 31 10:56 2022