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LOCUS AY471966 943 bp RNA linear VRL 07-JUN-2004
DEFINITION HIV-1 isolate 216120 from USA pol protein (pol) gene, partial cds
ACCESSION AY471966
VERSION AY471966.1 GI:44887334
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 943)
Show all sequences for reference 1
AUTHORS Weinstock,H.S., Zaidi,I., Heneine,W., Bennett,D.,
Garcia-Lerma,J.G., Douglas,J.M. Jr.., LaLota,M., Dickinson,G.,
Schwarcz,S., Torian,L., Wendell,D., Paul,S., Goza,G.A., Ruiz,J.,
Boyett,B. and Kaplan,J.E.
TITLE The Epidemiology of Antiretroviral Drug Resistance among Drug-Naive
HIV-1-Infected Persons in 10 US Cities
JOURNAL J. Infect. Dis. 189 (12), 2174-2180 (2004)
PUBMED 15181563
REFERENCE 2 (bases 1 to 943)
Show all sequences for reference 2
AUTHORS Weinstock,H., Zaidi,I., Heneine,W., Bennett,D., Garcia-Lerma,G. and
Kaplan,J.
TITLE Direct Submission
JOURNAL Submitted (18-NOV-2003) Division of HIV/AIDS Prevention,
Surveillance and Epidemiology, Centers for Disease Control and
Prevention, 1600 Clifton Road, MS E02, Atlanta, GA 30333, USA
FEATURES Location/Qualifiers
source 1..943
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="216120"
/db_xref="taxon:11676"
/country="USA"
gene <1..>943
/gene="pol"
CDS <1..>943
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAS47995.1"
/db_xref="GI:44887335"
/translation="VVEEMSLPGKWKPKMIGGIGGFIKVKQYEQILVEICGHKAIGTV
LVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKAL
VEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQL
GIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLP
QGWKGSPAIFQSSMTKILDPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQH
LLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVL"
BASE COUNT 369 a 148 c 195 g 231 t
ORIGIN
1 gtagtagaag aaatgagttt gccaggaaaa tggaaaccaa aaatgatagg gggaattgga
61 ggttttatca aagtaaaaca gtatgagcag atactcgtag aaatttgtgg gcataaagct
121 ataggtacag tattagtagg acctacacct gtcaacataa tcggaagaaa tctgttgact
181 cagattggtt gcactttaaa ttttcccatt agtcctattg aaactgtacc agtaaaatta
241 aagccaggaa tggatggccc aaaagttaaa caatggccgt tgacagaaga aaaaataaaa
301 gcattagtag aaatttgtac agaaatggaa aaggaaggga aaatttcaaa aattgggcct
361 gaaaatccat acaatactcc agtatttgcc ataaagaaaa aggatagtac taaatggaga
421 aaattagtag atttcagaga acttaataag agaacccaag acttctggga agttcaatta
481 ggaataccac atcccgcagg gttaaaaaag aaaaaatcag taacagtgct ggatgtgggt
541 gatgcatatt tttcagttcc cttagataaa gactttagga agtatactgc atttaccata
601 cctagtataa acaatgagac accagggatt agatatcagt acaatgtgct tccacaggga
661 tggaaaggat caccagcaat attccaaagt agcatgacaa aaatcttaga tccttttaga
721 aaacaaaatc cagacatagt tatctatcaa tacatggatg atttgtatgt aggatctgac
781 ttagaaatag gacagcatag aacaaaaata gaggaactga gacaacatct gttgaagtgg
841 ggatttacca caccagataa aaaacatcag aaagaacctc cattcctttg gatgggctat
901 gaactccatc ctgataaatg gacagtacag cctatagtgc tgc
//
last modified: Tue May 31 10:56 2022