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LOCUS	    AY455381		     297 bp    RNA     linear	VRL 12-APR-2004
DEFINITION  HIV-1 isolate patient 81 clone PR2 from USA protease (pol) gene,
	    partial cds
ACCESSION   AY455381
VERSION     AY455381.1 GI:42564410
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Kieffer,T.L., Finucane,M.M., Nettles,R.E., Quinn,T.C., Broman,K.W.,
	    Ray,S.C., Persaud,D. and Siliciano,R.F.
  TITLE     Genotypic Analysis of HIV-1 Drug Resistance at the Limit of
	    Detection: Virus Production without Evolution in Treated Adults
	    with Undetectable HIV Loads
  JOURNAL   J. Infect. Dis. 189 (8), 1452-1465 (2004)
  PUBMED    15073683
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Kieffer,T.L., Finucane,M.M., Nettles,R.E., Quinn,T.C., Broman,K.W.,
	    Ray,S.C., Persaud,D. and Siliciano,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2003) Department of Medicine, Division of
	    Infectious Diseases, Johns Hopkins University School of Medicine,
	    720 Rutland Avenue, Ross 1049, Baltimore, MD 21205, USA
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="patient 81"
		     /isolation_source="plasma from patient with 22 months of
		     ART"
		     /db_xref="taxon:11676"
		     /clone="PR2"
		     /country="USA"
     gene	     <1..>297
		     /gene="pol"
		     /note="PR"
     CDS	     <1..>297
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAS20681.1"
		     /db_xref="GI:42564411"
		     /translation="PQITLWQRPLVTIKIEGQLKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVRQYDQVTIDICGHKATGTVLIGPTPVNIIGRNLLTQIGCTLNF"
BASE COUNT	110 a	  49 c	   65 g     73 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccctc gtcacaataa agatagaggg gcaactaaaa 
      61 gaggctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggcttta tcaaagtaag acagtatgat 
     181 caggtaacca tagacatctg tggacataag gctacaggta cagtattaat aggacctaca 
     241 cctgtcaata taattggaag aaatctattg actcagattg gttgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022


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