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LOCUS AY429226 297 bp RNA linear VRL 05-JAN-2004
DEFINITION HIV-1 isolate C42p20_5.6 from USA protease (pol) gene, partial cds
ACCESSION AY429226
VERSION AY429226.1 GI:40455960
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 297)
Show all sequences for reference 1
AUTHORS Persaud,D., Siberry,G.K., Ahonkhai,A., Kajdas,J., Monie,D.,
Hutton,N., Watson,D.C., Quinn,T.C., Ray,S.C. and Siliciano,R.F.
TITLE Continued Production of Drug-Sensitive Human Immunodeficiency Virus
Type 1 in Children on Combination Antiretroviral Therapy Who Have
Undetectable Viral Loads
JOURNAL J. Virol. 78 (2), 968-979 (2004)
PUBMED 14694128
REFERENCE 2 (bases 1 to 297)
Show all sequences for reference 2
AUTHORS Persaud,D., Siberry,G.K., Ahonkhai,A., Kajdas,J., Monie,D.,
Hutton,N., Watson,D.C., Quinn,T.C., Ray,S.C. and Siliciano,R.F.
TITLE Direct Submission
JOURNAL Submitted (08-OCT-2003) Department of Medicine, Division of
Infectious Diseases, Johns Hopkins University School of Medicine,
720 Rutland Avenue, Ross 1049, Baltimore, MD 21205, USA
FEATURES Location/Qualifiers
source 1..297
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="C42p20_5.6"
/isolation_source="plasma; pediatric patient C42, 20
months of ART"
/db_xref="taxon:11676"
/clone="5.6"
/country="USA"
/note="subtype: B"
gene <1..>297
/gene="pol"
CDS <1..>297
/gene="pol"
/note="PR"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="AAR86070.1"
/db_xref="GI:40455961"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKP
KMIGGIGGFIKVRLYEQIPIEICGHKAEGTVLVGPTPVNIIGRNLLTQIGCTLNF"
BASE COUNT 109 a 50 c 67 g 71 t
ORIGIN
1 cctcaaatca ctctttggca acgacccctc gtcacaataa agataggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag actgtatgaa
181 cagataccca tagaaatctg tggacataaa gctgaaggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gttgcactct aaatttc
//
last modified: Tue May 31 10:56 2022