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LOCUS	    AY429205		     297 bp    RNA     linear	VRL 05-JAN-2004
DEFINITION  HIV-1 isolate C40p12_5.1 from Kenya protease (pol) gene, partial
	    cds
ACCESSION   AY429205
VERSION     AY429205.1 GI:40455918
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Persaud,D., Siberry,G.K., Ahonkhai,A., Kajdas,J., Monie,D.,
	    Hutton,N., Watson,D.C., Quinn,T.C., Ray,S.C. and Siliciano,R.F.
  TITLE     Continued Production of Drug-Sensitive Human Immunodeficiency Virus
	    Type 1 in Children on Combination Antiretroviral Therapy Who Have
	    Undetectable Viral Loads
  JOURNAL   J. Virol. 78 (2), 968-979 (2004)
  PUBMED    14694128
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Persaud,D., Siberry,G.K., Ahonkhai,A., Kajdas,J., Monie,D.,
	    Hutton,N., Watson,D.C., Quinn,T.C., Ray,S.C. and Siliciano,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-OCT-2003) Department of Medicine, Division of
	    Infectious Diseases, Johns Hopkins University School of Medicine,
	    720 Rutland Avenue, Ross 1049, Baltimore, MD 21205, USA
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="C40p12_5.1"
		     /isolation_source="plasma; pediatric patient C40, 12
		     months of ART"
		     /db_xref="taxon:11676"
		     /clone="5.1"
		     /country="Kenya"
		     /note="subtype: A2"
     gene	     <1..>297
		     /gene="pol"
     CDS	     <1..>297
		     /gene="pol"
		     /note="PR"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAR86049.1"
		     /db_xref="GI:40455919"
		     /translation="PQITLWQRPLVPIRIEGQLKEALLDTGADDTVLEDINLPGKWKP
		     KMIGGIGGFIKVRQYDQINIEICGKKAIGTVLVGPTPVNIIGRNMLVQLGCTLNF"
BASE COUNT	112 a	  45 c	   64 g     76 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccctt gtcccaataa gaatagaagg acagctaaag 
      61 gaagctctat tagatacagg agcagatgat acagtgttag aagacataaa tctaccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 
     181 cagataaata tagaaatttg tggaaaaaag gccataggta cagtattagt gggacctacc 
     241 cctgtcaaca taattggaag aaatatgttg gttcagcttg gttgtacttt aaatttt
//
last modified: Tue May 31 10:56 2022


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