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LOCUS	    AY365560		    1497 bp    RNA     linear	VRL 06-DEC-2005
DEFINITION  HIV-1 isolate 97953 from Argentina pol protein (pol) gene, partial
	    cds
ACCESSION   AY365560
VERSION     AY365560.1 GI:42716963
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1497)
            Show all sequences for reference 1
  AUTHORS   Gomez-Carrillo,M., Quarleri,J.F., Rubio,A.E., Carobene,M.G.,
	    Dilernia,D., Carr,J.K. and Salomon,H.
  TITLE     Drug Resistance Testing Provides Evidence of the Globalization of
	    HIV Type 1: A New Circulating Recombinant Form
  JOURNAL   AIDS Res. Hum. Retroviruses 20 (8), 885-888 (2004)
  PUBMED    15320992
REFERENCE   2 (bases 1 to 1497)
            Show all sequences for reference 2
  AUTHORS   Quarleri,J.F., Rubio,A., Carobene,M., Turk,G., Vignoles,M.,
	    Harrigan,R.P., Montaner,J.S., Salomon,H. and Gomez-Carrillo,M.
  TITLE     HIV type 1 BF recombinant strains exhibit different pol gene mosaic
	    patterns: descriptive analysis from 284 patients under treatment
	    failure
  JOURNAL   AIDS Res. Hum. Retroviruses 20 (10), 1100-1107 (2004)
  PUBMED    15585101
REFERENCE   3 (bases 1 to 1497)
            Show all sequences for reference 3
  AUTHORS   Rubio,A.E., Salomon,H.E., Gomez Carrillo,M., Carobene,M.G. and
	    Quarleri,J.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-AUG-2003) Department of Microbiology, Immunology and
	    Parasitology, National Reference Center for AIDS, School of
	    Medicine, University of Buenos Aires, Paraguay 2155 piso 11, Buenos
	    Aires C1121ABG, Argentina
FEATURES             Location/Qualifiers
     source	     1..1497
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="97953"
		     /db_xref="taxon:11676"
		     /country="Argentina"
     gene	     <1..>1497
		     /gene="pol"
     CDS	     <1..>1497
		     /gene="pol"
		     /note="encodes for protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAS37936.1"
		     /db_xref="GI:42716964"
		     /translation="PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPRVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVP
		     LDENFRKYTAFTIPSVNNETPGXRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
		     IVIYQYVDDLYVGSDLELGKHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIKLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLIRGTKALTEVV
		     PLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKT
		     GKYAKMRSAHTNDVKQLTEXVQKIATESIVIWGKTPKFRLPIQRETWDA"
BASE COUNT	600 a	 239 c	  315 g    334 t      9 other
ORIGIN
       1 cctcaaatca ctctttggca acgacccctc gtcacaataa aggtaggggg gcagctaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga 
     121 agatggaagc caaaaatgat agggggaatt ggaggtttta tcaaagtrag acagtatgat 
     181 cagatactca tagaaatttg tggacacaaa gctataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagattg gctgcactyt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccmg gaatggatgg cccaagagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg 
     421 gaaaaggaag gaaaaatttc aaaaatwggg cctgaaaatc catacaatac tccagtattt 
     481 gctataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aaaagaactc aagacttctg ggaagttcaa ttaggaatac cacatcctgc agggttaaaa 
     601 aagaacaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcctttagat 
     661 gagaacttca ggaagtatac tgcattyacc atacctagtg taaacaatga gacaccagga 
     721 rttagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agttatctac 
     841 cartatgtgg atgatytgta tgtaggatct gacttagaac tagggaagca tagaacaaaa 
     901 atagaggaac tgagacaaca tctgttgagg tggggattta ccacaccaga caaaaaacat 
     961 caaaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 cagcctataa agctgccaga aaaagatagc tggactgtca atgacataca gaagttagtg 
    1081 ggaaaattaa attgggcaag tcagatttat gcaggaatta aagtaaagca attatgtaaa 
    1141 ctcattaggg gaaccaaagc actaacagaa gtagtgccac taacagaaga agcagagcta 
    1201 gaattggcag aaaacaggga gattctaaaa gaaccagtac atggagtgta ttatgaccca 
    1261 tcaaaagact taatagcaga aatacagaag caggggcaag gccaatggac atatcaaatt 
    1321 tatcaagagc catttaaaaa tctgaaaaca ggaaagtatg caaaaatgag gagtgcccac 
    1381 actaatgatg taaaacaatt aacagaggya gtacaaaaaa tagccacaga aagcatagta 
    1441 atatggggaa agactcctaa atttagatta cccatacaaa gggaaacatg ggatgca
//
last modified: Tue May 31 10:56 2022


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