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LOCUS AY365560 1497 bp RNA linear VRL 06-DEC-2005
DEFINITION HIV-1 isolate 97953 from Argentina pol protein (pol) gene, partial
cds
ACCESSION AY365560
VERSION AY365560.1 GI:42716963
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1497)
Show all sequences for reference 1
AUTHORS Gomez-Carrillo,M., Quarleri,J.F., Rubio,A.E., Carobene,M.G.,
Dilernia,D., Carr,J.K. and Salomon,H.
TITLE Drug Resistance Testing Provides Evidence of the Globalization of
HIV Type 1: A New Circulating Recombinant Form
JOURNAL AIDS Res. Hum. Retroviruses 20 (8), 885-888 (2004)
PUBMED 15320992
REFERENCE 2 (bases 1 to 1497)
Show all sequences for reference 2
AUTHORS Quarleri,J.F., Rubio,A., Carobene,M., Turk,G., Vignoles,M.,
Harrigan,R.P., Montaner,J.S., Salomon,H. and Gomez-Carrillo,M.
TITLE HIV type 1 BF recombinant strains exhibit different pol gene mosaic
patterns: descriptive analysis from 284 patients under treatment
failure
JOURNAL AIDS Res. Hum. Retroviruses 20 (10), 1100-1107 (2004)
PUBMED 15585101
REFERENCE 3 (bases 1 to 1497)
Show all sequences for reference 3
AUTHORS Rubio,A.E., Salomon,H.E., Gomez Carrillo,M., Carobene,M.G. and
Quarleri,J.F.
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2003) Department of Microbiology, Immunology and
Parasitology, National Reference Center for AIDS, School of
Medicine, University of Buenos Aires, Paraguay 2155 piso 11, Buenos
Aires C1121ABG, Argentina
FEATURES Location/Qualifiers
source 1..1497
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="97953"
/db_xref="taxon:11676"
/country="Argentina"
gene <1..>1497
/gene="pol"
CDS <1..>1497
/gene="pol"
/note="encodes for protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAS37936.1"
/db_xref="GI:42716964"
/translation="PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEEMNLPGRWKP
KMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPRVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVP
LDENFRKYTAFTIPSVNNETPGXRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
IVIYQYVDDLYVGSDLELGKHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIKLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLIRGTKALTEVV
PLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKT
GKYAKMRSAHTNDVKQLTEXVQKIATESIVIWGKTPKFRLPIQRETWDA"
BASE COUNT 600 a 239 c 315 g 334 t 9 other
ORIGIN
1 cctcaaatca ctctttggca acgacccctc gtcacaataa aggtaggggg gcagctaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga
121 agatggaagc caaaaatgat agggggaatt ggaggtttta tcaaagtrag acagtatgat
181 cagatactca tagaaatttg tggacacaaa gctataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gctgcactyt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccmg gaatggatgg cccaagagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg
421 gaaaaggaag gaaaaatttc aaaaatwggg cctgaaaatc catacaatac tccagtattt
481 gctataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aaaagaactc aagacttctg ggaagttcaa ttaggaatac cacatcctgc agggttaaaa
601 aagaacaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcctttagat
661 gagaacttca ggaagtatac tgcattyacc atacctagtg taaacaatga gacaccagga
721 rttagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agttatctac
841 cartatgtgg atgatytgta tgtaggatct gacttagaac tagggaagca tagaacaaaa
901 atagaggaac tgagacaaca tctgttgagg tggggattta ccacaccaga caaaaaacat
961 caaaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctataa agctgccaga aaaagatagc tggactgtca atgacataca gaagttagtg
1081 ggaaaattaa attgggcaag tcagatttat gcaggaatta aagtaaagca attatgtaaa
1141 ctcattaggg gaaccaaagc actaacagaa gtagtgccac taacagaaga agcagagcta
1201 gaattggcag aaaacaggga gattctaaaa gaaccagtac atggagtgta ttatgaccca
1261 tcaaaagact taatagcaga aatacagaag caggggcaag gccaatggac atatcaaatt
1321 tatcaagagc catttaaaaa tctgaaaaca ggaaagtatg caaaaatgag gagtgcccac
1381 actaatgatg taaaacaatt aacagaggya gtacaaaaaa tagccacaga aagcatagta
1441 atatggggaa agactcctaa atttagatta cccatacaaa gggaaacatg ggatgca
//
last modified: Tue May 31 10:56 2022