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LOCUS AY365528 1497 bp RNA linear VRL 06-DEC-2005
DEFINITION HIV-1 isolate 96460 from Argentina pol protein (pol) gene, partial
cds
ACCESSION AY365528
VERSION AY365528.1 GI:42716899
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1497)
Show all sequences for reference 1
AUTHORS Gomez-Carrillo,M., Quarleri,J.F., Rubio,A.E., Carobene,M.G.,
Dilernia,D., Carr,J.K. and Salomon,H.
TITLE Drug Resistance Testing Provides Evidence of the Globalization of
HIV Type 1: A New Circulating Recombinant Form
JOURNAL AIDS Res. Hum. Retroviruses 20 (8), 885-888 (2004)
PUBMED 15320992
REFERENCE 2 (bases 1 to 1497)
Show all sequences for reference 2
AUTHORS Quarleri,J.F., Rubio,A., Carobene,M., Turk,G., Vignoles,M.,
Harrigan,R.P., Montaner,J.S., Salomon,H. and Gomez-Carrillo,M.
TITLE HIV type 1 BF recombinant strains exhibit different pol gene mosaic
patterns: descriptive analysis from 284 patients under treatment
failure
JOURNAL AIDS Res. Hum. Retroviruses 20 (10), 1100-1107 (2004)
PUBMED 15585101
REFERENCE 3 (bases 1 to 1497)
Show all sequences for reference 3
AUTHORS Rubio,A.E., Salomon,H.E., Gomez Carrillo,M., Carobene,M.G. and
Quarleri,J.F.
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2003) Department of Microbiology, Immunology and
Parasitology, National Reference Center for AIDS, School of
Medicine, University of Buenos Aires, Paraguay 2155 piso 11, Buenos
Aires C1121ABG, Argentina
FEATURES Location/Qualifiers
source 1..1497
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="96460"
/db_xref="taxon:11676"
/country="Argentina"
gene <1..>1497
/gene="pol"
CDS <1..>1497
/gene="pol"
/note="encodes for protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAS37904.1"
/db_xref="GI:42716900"
/translation="PQITLWQRPLVTIRVGGQLKEALLDTGADDTVLEDINLPGKWKP
KMIGGIGGFIKVKQYEEVLIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIEXVPVKLKPGMDGPKVKQWPLXEEKIKALVEICTEMEKEGKISRIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTIILDPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRTKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIVLXEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLXRGXKALXEVV
PLXQEAELELAENREILKXPVHGVYYDQSKPLIAEIQKQGQGQWTYQIYQEPFKNLKT
GKYARMRGAHTNDVKQLTEAVQKITXESIVIWGKTPKFKLPILKETWDX"
BASE COUNT 591 a 243 c 315 g 336 t 12 other
ORIGIN
1 cctcaaatca ctctttggca acgaccccta gtcacaataa gagtaggggg acagctaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagacataaa tttaccagga
121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaaa acagtatgag
181 gaagtactca tagaaatttg tggacacaag gctataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gttgtacttt aaattttccc
301 attagtccta ttgaamctgt accagtaaaa ttaaagccag gaatggatgg sccaaaagtt
361 aaacaatggc cattamcaga agaaaaaata aaagcattag tagaaatctg tacagaaatg
421 gaaaaggaag ggaaaatttc aagaattggg cctgaaaatc catataatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc aggtttaaaa
601 aagaaaaagt cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaggaattca ggaagtacac tgcattcacc atacccagta taaacaatga gacaccaggg
721 attagatatc agtacaatgt acttccacag ggatggaaag gatcaccagc aatattccaa
781 agcagcatga caataatctt agatcctttt agaaaacaaa atccggacat agttatctat
841 caatacatgg atgatttgta tgtaggatct gatttagaaa tagggcagca tagaacaaaa
901 atagaggaac tgagagaaca tctattgagg tgggggttta ccacaccaga caagaaacat
961 caaaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctatag tgctgscaga aaargacagc tggactgtca atgacataca gaaattagtg
1081 ggaaaattga attgggcaag tcagatttac ccagggatta aagtaaagca attatgtaga
1141 ctcmttaggg gamccaaggc actamcagaa gtagtgccac tamcacagga agcagagcta
1201 gaactggcag aaaacaggga aattctaaaa gamccagtac atggagtgta ttatgaccaa
1261 tcaaagcctt taatagcaga aatacagaag caggggcaag gccaatggac atatcaaatt
1321 tatcaagagc catttaagaa tctgaaaaca ggaaaatatg caagaatgag gggtgcccac
1381 actaatgatg taaaacaatt aacagaggca gtgcaaaaaa taaccmcaga aagcatagta
1441 atatggggaa agactcctaa gtttaaacta cccatattaa aagagacatg ggatmca
//
last modified: Tue May 31 10:56 2022