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LOCUS AY365496 1497 bp RNA linear VRL 06-DEC-2005
DEFINITION HIV-1 isolate 94272 from Argentina pol protein (pol) gene, partial
cds
ACCESSION AY365496
VERSION AY365496.1 GI:42716835
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1497)
Show all sequences for reference 1
AUTHORS Gomez-Carrillo,M., Quarleri,J.F., Rubio,A.E., Carobene,M.G.,
Dilernia,D., Carr,J.K. and Salomon,H.
TITLE Drug Resistance Testing Provides Evidence of the Globalization of
HIV Type 1: A New Circulating Recombinant Form
JOURNAL AIDS Res. Hum. Retroviruses 20 (8), 885-888 (2004)
PUBMED 15320992
REFERENCE 2 (bases 1 to 1497)
Show all sequences for reference 2
AUTHORS Quarleri,J.F., Rubio,A., Carobene,M., Turk,G., Vignoles,M.,
Harrigan,R.P., Montaner,J.S., Salomon,H. and Gomez-Carrillo,M.
TITLE HIV type 1 BF recombinant strains exhibit different pol gene mosaic
patterns: descriptive analysis from 284 patients under treatment
failure
JOURNAL AIDS Res. Hum. Retroviruses 20 (10), 1100-1107 (2004)
PUBMED 15585101
REFERENCE 3 (bases 1 to 1497)
Show all sequences for reference 3
AUTHORS Rubio,A.E., Salomon,H.E., Gomez Carrillo,M., Carobene,M.G. and
Quarleri,J.F.
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2003) Department of Microbiology, Immunology and
Parasitology, National Reference Center for AIDS, School of
Medicine, University of Buenos Aires, Paraguay 2155 piso 11, Buenos
Aires C1121ABG, Argentina
FEATURES Location/Qualifiers
source 1..1497
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="94272"
/db_xref="taxon:11676"
/country="Argentina"
gene <1..>1497
/gene="pol"
CDS <1..>1497
/gene="pol"
/note="encodes for protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAS37872.1"
/db_xref="GI:42716836"
/translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEMSLPGRWKP
KMIGGIGGFIKVRQYDQVPIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIXTVPVKLKPGMDGPKXXQWPLTEEKIKALVEICXEMEKEGKISRIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVXVLDVGDAYFSVP
LDKDFRKYTAFTIPSTNNEKPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLXRWGLTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIILPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLIRGTKALTEVV
PLTEEAELELAENREILKEPVHGVYYDPSKDLIAEVQKQGXGQWTYQFYQEPFKNLKT
GKYAKMRGAHTNDVKQLTEAVQKIATESIVTWGKIPKFKLPIQKETWEA"
BASE COUNT 589 a 247 c 322 g 322 t 17 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacagtaa agataggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgag tttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 caggtaccca tagagatctg tggacataaa gctataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gktgcacttt aaattttccc
301 attagtccta ttgraactgt accagtaaaa ttaaagccmg gaatggatgg cccaaaagkt
361 waacagtggc cattgacaga agaaaaaata aaagcattag tagaaatttg takggagatg
421 gaaaaggaag gaaaaatttc aagaattggg cctgaaaatc catataatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aaaagaactc aagacttctg ggaagttcaa ctaggaatac cacatcccgc agggctaaaa
601 aagaaaaaat cagtamcagt actggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaagacttca ggaagtatac tgcattcacc atacctagta caaacaatga gaaaccaggr
721 attaggtatc agtacaatgt gctcccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caagaatctt agagcctttt agaaaacaaa ayccagacat agttatctat
841 caatatatgg atgatttgta tgtaggatct gacttagaaa taggacagca tagaacaaaa
901 atagaggaac tgagacaaca tctgktgagg tggggactta ccacaccaga caaaaaacat
961 cagaaagaac ctccattcct ktggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctataa tactgccaga gaaagacagc tggacggtca atgacataca gaagttagtg
1081 ggaaaaytga attgggcaag tcagatttat gcagggatya aggtaaggca attatgtaaa
1141 ctcattaggg gaaccaaagc actaacagar gtagtaccac taacagaaga agcagagcta
1201 gaactggcag agaacaggga gattctaaaa gaaccagtac atggagtgta ttatgaccca
1261 tcaaaagact taatagcaga agtacagaag caggggcmag gccartggac mtatcagttt
1321 tatcaagaac catttaaaaa tctgaaaaca ggaaaatatg caaaaatgag gggtgcccat
1381 actaatgatg taaaacaact aacagaagca gtgcaaaaaa tagccacaga aagcatagtc
1441 acatggggaa agattcctaa atttaaatta cccatacaaa aagaaacatg ggaagca
//
last modified: Tue May 31 10:56 2022