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LOCUS AY365472 1497 bp RNA linear VRL 06-DEC-2005
DEFINITION HIV-1 isolate 91938 from Argentina pol protein (pol) gene, partial
cds
ACCESSION AY365472
VERSION AY365472.1 GI:42716787
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1497)
Show all sequences for reference 1
AUTHORS Gomez-Carrillo,M., Quarleri,J.F., Rubio,A.E., Carobene,M.G.,
Dilernia,D., Carr,J.K. and Salomon,H.
TITLE Drug Resistance Testing Provides Evidence of the Globalization of
HIV Type 1: A New Circulating Recombinant Form
JOURNAL AIDS Res. Hum. Retroviruses 20 (8), 885-888 (2004)
PUBMED 15320992
REFERENCE 2 (bases 1 to 1497)
Show all sequences for reference 2
AUTHORS Quarleri,J.F., Rubio,A., Carobene,M., Turk,G., Vignoles,M.,
Harrigan,R.P., Montaner,J.S., Salomon,H. and Gomez-Carrillo,M.
TITLE HIV type 1 BF recombinant strains exhibit different pol gene mosaic
patterns: descriptive analysis from 284 patients under treatment
failure
JOURNAL AIDS Res. Hum. Retroviruses 20 (10), 1100-1107 (2004)
PUBMED 15585101
REFERENCE 3 (bases 1 to 1497)
Show all sequences for reference 3
AUTHORS Rubio,A.E., Salomon,H.E., Gomez Carrillo,M., Carobene,M.G. and
Quarleri,J.F.
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2003) Department of Microbiology, Immunology and
Parasitology, National Reference Center for AIDS, School of
Medicine, University of Buenos Aires, Paraguay 2155 piso 11, Buenos
Aires C1121ABG, Argentina
FEATURES Location/Qualifiers
source 1..1497
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="91938"
/db_xref="taxon:11676"
/country="Argentina"
gene <1..>1497
/gene="pol"
CDS <1..>1497
/gene="pol"
/note="encodes for protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAS37848.1"
/db_xref="GI:42716788"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEXNLPGRWKP
KMIGGIGGFIKVRQYDQVAIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALLEICTEMEKEGKITKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKXKSMTVLDVGDAYFSVP
LDKEFRKYTAFTIPSXNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPD
LDIYQYVDDLYVGSDLEIGQHRTKIEELRQHLLKWGLTTPDKKHQKEPPFLWMGYELH
PBKWTVQPITLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVV
PLTKEAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIFQEPFKNLKT
GKYARVRGTHTNDVKQLTEAVQKIATESIVIWGKIPKFXLPIQKETWET"
BASE COUNT 593 a 240 c 318 g 336 t 10 other
ORIGIN
1 cctcagatca ctctttggca acgvcccctc gtcacaataa agataggggg gcaactaaag
61 gaagctttat tagatacagg agcagatgat acagtattag aagaaatraa tttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 caggtagcca tagaaatctg tggacataaa gctataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gctgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattat tagaaatttg tacagaaatg
421 gaaaaggaag gaaagattac aaaaattggg cctgaaaatc catataatac tccagtattt
481 gccataaaga aaaaagacag cactaaatgg agaaagttgg tagatttcag agaacttaat
541 aagagaactc aggacttttg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa
601 aagaraaaat caatgacagt actggatgtg ggggatgcat atttttcagt tcccttagat
661 aaagaattca ggaagtatac tgcatttact atacctagtr taaacaatga gacaccaggg
721 attagatatc agtacaatgt gcttccacag ggatggaagg gatcaccagc aatattccaa
781 agtagcatga caagaatctt agagcctttt agaaaacaaa atccagacct agatatctat
841 caatacgtgg atgatttgta tgtaggatct gacttagaaa tagggcaaca tagaacaaaa
901 atagaagaac tgagacagca tctgttgaag tggggactta ccacaccaga caaaaaacat
961 cagaaagaac ccccrttyct ttggatgggt tatgaactcc atcctrataa atggacrgta
1021 cagcctataa cgctgccaga aaaagatagc tggactgtca atgacataca gaagttagtg
1081 ggaaaattaa attgggcaag tcagatttat ccaggaatta aagtaaggca attatgtaaa
1141 ctccttaggg gaaccaaagc actaacagaa gtagtaccac taacaaaaga agcagaacta
1201 gaactggcag aaaayaggga gattttaaaa gagccagtac atggagtgta ttatgatcca
1261 tcaaaagact taatagcaga attacagaag caagggcaag gccagtggac atatcaaatt
1321 tttcaagagc catttaaaaa tctgaaaaca ggaaagtatg caagagtgag gggtacccac
1381 actaatgatg taaaacagtt aacagaggca gtgcaaaaaa tagccacaga aagcatagtg
1441 atatggggaa agattcctaa atttargtta cccatacaaa aagaaacatg ggagaca
//
last modified: Tue May 31 10:56 2022