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LOCUS	    AY365472		    1497 bp    RNA     linear	VRL 06-DEC-2005
DEFINITION  HIV-1 isolate 91938 from Argentina pol protein (pol) gene, partial
	    cds
ACCESSION   AY365472
VERSION     AY365472.1 GI:42716787
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1497)
            Show all sequences for reference 1
  AUTHORS   Gomez-Carrillo,M., Quarleri,J.F., Rubio,A.E., Carobene,M.G.,
	    Dilernia,D., Carr,J.K. and Salomon,H.
  TITLE     Drug Resistance Testing Provides Evidence of the Globalization of
	    HIV Type 1: A New Circulating Recombinant Form
  JOURNAL   AIDS Res. Hum. Retroviruses 20 (8), 885-888 (2004)
  PUBMED    15320992
REFERENCE   2 (bases 1 to 1497)
            Show all sequences for reference 2
  AUTHORS   Quarleri,J.F., Rubio,A., Carobene,M., Turk,G., Vignoles,M.,
	    Harrigan,R.P., Montaner,J.S., Salomon,H. and Gomez-Carrillo,M.
  TITLE     HIV type 1 BF recombinant strains exhibit different pol gene mosaic
	    patterns: descriptive analysis from 284 patients under treatment
	    failure
  JOURNAL   AIDS Res. Hum. Retroviruses 20 (10), 1100-1107 (2004)
  PUBMED    15585101
REFERENCE   3 (bases 1 to 1497)
            Show all sequences for reference 3
  AUTHORS   Rubio,A.E., Salomon,H.E., Gomez Carrillo,M., Carobene,M.G. and
	    Quarleri,J.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-AUG-2003) Department of Microbiology, Immunology and
	    Parasitology, National Reference Center for AIDS, School of
	    Medicine, University of Buenos Aires, Paraguay 2155 piso 11, Buenos
	    Aires C1121ABG, Argentina
FEATURES             Location/Qualifiers
     source	     1..1497
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="91938"
		     /db_xref="taxon:11676"
		     /country="Argentina"
     gene	     <1..>1497
		     /gene="pol"
     CDS	     <1..>1497
		     /gene="pol"
		     /note="encodes for protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAS37848.1"
		     /db_xref="GI:42716788"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEXNLPGRWKP
		     KMIGGIGGFIKVRQYDQVAIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALLEICTEMEKEGKITKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKXKSMTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSXNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPD
		     LDIYQYVDDLYVGSDLEIGQHRTKIEELRQHLLKWGLTTPDKKHQKEPPFLWMGYELH
		     PBKWTVQPITLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVV
		     PLTKEAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIFQEPFKNLKT
		     GKYARVRGTHTNDVKQLTEAVQKIATESIVIWGKIPKFXLPIQKETWET"
BASE COUNT	593 a	 240 c	  318 g    336 t     10 other
ORIGIN
       1 cctcagatca ctctttggca acgvcccctc gtcacaataa agataggggg gcaactaaag 
      61 gaagctttat tagatacagg agcagatgat acagtattag aagaaatraa tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 caggtagcca tagaaatctg tggacataaa gctataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagattg gctgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattat tagaaatttg tacagaaatg 
     421 gaaaaggaag gaaagattac aaaaattggg cctgaaaatc catataatac tccagtattt 
     481 gccataaaga aaaaagacag cactaaatgg agaaagttgg tagatttcag agaacttaat 
     541 aagagaactc aggacttttg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa 
     601 aagaraaaat caatgacagt actggatgtg ggggatgcat atttttcagt tcccttagat 
     661 aaagaattca ggaagtatac tgcatttact atacctagtr taaacaatga gacaccaggg 
     721 attagatatc agtacaatgt gcttccacag ggatggaagg gatcaccagc aatattccaa 
     781 agtagcatga caagaatctt agagcctttt agaaaacaaa atccagacct agatatctat 
     841 caatacgtgg atgatttgta tgtaggatct gacttagaaa tagggcaaca tagaacaaaa 
     901 atagaagaac tgagacagca tctgttgaag tggggactta ccacaccaga caaaaaacat 
     961 cagaaagaac ccccrttyct ttggatgggt tatgaactcc atcctrataa atggacrgta 
    1021 cagcctataa cgctgccaga aaaagatagc tggactgtca atgacataca gaagttagtg 
    1081 ggaaaattaa attgggcaag tcagatttat ccaggaatta aagtaaggca attatgtaaa 
    1141 ctccttaggg gaaccaaagc actaacagaa gtagtaccac taacaaaaga agcagaacta 
    1201 gaactggcag aaaayaggga gattttaaaa gagccagtac atggagtgta ttatgatcca 
    1261 tcaaaagact taatagcaga attacagaag caagggcaag gccagtggac atatcaaatt 
    1321 tttcaagagc catttaaaaa tctgaaaaca ggaaagtatg caagagtgag gggtacccac 
    1381 actaatgatg taaaacagtt aacagaggca gtgcaaaaaa tagccacaga aagcatagtg 
    1441 atatggggaa agattcctaa atttargtta cccatacaaa aagaaacatg ggagaca
//
last modified: Tue May 31 10:56 2022


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