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LOCUS	    AY351750		     942 bp    RNA     linear	VRL 03-JUN-2005
DEFINITION  HIV-1 isolate 3999-7303_3 from USA reverse transcriptase (pol)
	    gene, partial cds
ACCESSION   AY351750
VERSION     AY351750.1 GI:33439623
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 942)
            Show all sequences for reference 1
  AUTHORS   Gonzales,M.J., Johnson,E., Dupnik,K.M., Imamichi,T. and Shafer,R.W.
  TITLE     Colinearity of reverse transcriptase inhibitor resistance mutations
	    detected by population-based sequencing
  JOURNAL   J. Acquir. Immune Defic. Syndr. 34 (4), 398-402 (2003)
  PUBMED    14615657
REFERENCE   2 (bases 1 to 942)
            Show all sequences for reference 2
  AUTHORS   Gonzales,M.J., Johnston,E., Dupnik,K.M., Imamichi,T. and
	    Shafer,R.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUL-2003) Medicine-Division of Infectious Diseases,
	    Stanford University, 300 Pasteur Drive, Grant Building Room S-156,
	    Palo Alto, CA 94305-5107, USA
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Johnston,E., Dupnik,K.M., Gonzales,M.J., Winters,M.A., Rhee,S.Y.,
	    Imamichi,T. and Shafer,R.W.
  TITLE     Panel of prototypical infectious molecular HIV-1 clones containing
	    multiple nucleoside reverse transcriptase inhibitor resistance
	    mutations
  JOURNAL   AIDS 19 (7), 731-733 (2005)
  PUBMED    15821401
FEATURES             Location/Qualifiers
     source	     1..942
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="3999-7303_3"
		     /db_xref="taxon:11676"
		     /country="USA"
     gene	     <1..>942
		     /gene="pol"
     CDS	     <1..>942
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="AAQ18858.1"
		     /db_xref="GI:33439624"
		     /translation="PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTELEND
		     GKISKIGPENPYNTPVFAIKKKNSDKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKK
		     NKSVTVLDVGDAYFSIPLDEDFRKYTAFTIPSVNNQTPGIRYQYNVLPQGWKGSPAIF
		     QCSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIEQHRTKIKELREYLWKWGFYTPD
		     KKHQKEPPFLWMGYELHPDKWTVQPIALPEKDSWTVNDIQKLVGKLNWASQIYAGIKV
		     KHLCKLLRGAKALTEVISLTEEAELELAENREILKEPV"
BASE COUNT	375 a	 156 c	  197 g    214 t
ORIGIN
       1 cccattagtc ctattgagac tgtaccagta aaattaaagc caggaatgga tggcccaaaa 
      61 gttaaacaat ggccattgac agaagaaaaa ataaaagcat tagtagagat ctgtacagaa 
     121 ctggaaaatg atgggaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 
     181 tttgccataa agaagaaaaa cagtgataaa tggagaaaat tagtagattt cagagaactt 
     241 aataagagaa ctcaagattt ctgggaagtt caactaggaa taccacatcc ctcagggtta 
     301 aaaaagaaca aatcagtaac agtactggat gtgggtgatg catatttttc aattccctta 
     361 gatgaagact tcaggaagta tactgcattt accataccta gtgtaaacaa tcagacacca 
     421 gggattagat atcagtacaa tgtgcttcca cagggatgga agggatcacc agcaatattc 
     481 caatgcagca tgacaaaaat cttagagcct tttagaaaac aaaatccaga catagttatc 
     541 tatcaataca tggatgatct gtatgtagga tcggacttag agatagagca gcatagaaca 
     601 aaaataaagg aactgagaga atatctgtgg aagtgggggt tttacacacc agacaagaag 
     661 catcagaaag aacctccatt cctttggatg ggttatgaac ttcatcctga taaatggaca 
     721 gtacagccta tagcactgcc agagaaagac agttggactg tcaatgacat acaaaagtta 
     781 gtgggaaaat tgaattgggc aagtcaaatt tatgcaggga ttaaagtaaa gcacttatgt 
     841 aaactcctta ggggagccaa agcactaaca gaagtaatat cactaacaga agaagcagag 
     901 ctagaactgg cagaaaacag agaaattcta aaagaaccag ta
//
last modified: Tue May 31 10:56 2022


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