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LOCUS	    AY275771		     966 bp    RNA     linear	VRL 08-NOV-2006
DEFINITION  HIV-1 isolate 144PR_RT from Brazil pol protein (pol) gene, partial
	    cds
ACCESSION   AY275771
VERSION     AY275771.1 GI:34595867
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 966)
            Show all sequences for reference 1
  AUTHORS   Santos,A.F., Sousa,T.M., Soares,E.A., Sanabani,S., Martinez,A.M.,
	    Sprinz,E., Silveira,J., Sabino,E.C., Tanuri,A. and Soares,M.A.
  TITLE     Characterization of a new circulating recombinant form comprising
	    HIV-1 subtypes C and B in southern Brazil
  JOURNAL   AIDS 20 (16), 2011-2019 (2006)
  PUBMED    17053347
REFERENCE   2 (bases 1 to 966)
            Show all sequences for reference 2
  AUTHORS   Soares,E.A.J.M., Santos,R.P., Pellegrini,J.A., Sprinz,E., Tanuri,A.
	    and Soares,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2003) Genetica, Universidade Federal do Rio de
	    Janeiro, CCS Bloco A - sala A2-121 - Cidade Universitaria - Ilha do
	    Fundao, Rio de Janeiro, RJ 21944-970, Brazil
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Soares,E.A., Santos,R.P., Pellegrini,J.A., Sprinz,E., Tanuri,A. and
	    Soares,M.A.
  TITLE     Epidemiologic and molecular characterization of human
	    immunodeficiency virus type 1 in southern Brazil.
  JOURNAL   J. Acquir. Immune Defic. Syndr. 34 (5), 520-6 (2003)
  PUBMED    14657764
REFERENCE   4
            Show all sequences for reference 4
  AUTHORS   Soares,E.A.J.M., Santos,A.F.A., Sousa,T.M., Sprinz,E.,
	    Martinez,A.M.B., Silveira,J., Tanuri,A. and Soares,M.A.
  TITLE     Differential drug resistance acquisition in HIV-1 of subtypes B and
	    C.
  JOURNAL   PLoS. ONE.. 2(1); e730 (2007)
  PUBMED    17710130
FEATURES             Location/Qualifiers
     source	     1..966
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="144PR_RT"
		     /isolation_source="patient 144"
		     /db_xref="taxon:11676"
		     /country="Brazil"
     gene	     <1..>966
		     /gene="pol"
     CDS	     <1..>966
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAQ76655.1"
		     /db_xref="GI:34595868"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMDLPGKWKP
		     KMIGGIGGFIKVRQYDQVPIEICGHKAIGTVLIGPTPVNIIGRNMLTQLGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALAEICTDMEKEGKISRIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILDPFRTKNPD
		     IVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLQWGFPTPDKKHQK"
BASE COUNT	378 a	 159 c	  201 g    228 t
ORIGIN
       1 cctcaaatca ctctttggca acgaccctta gtcacaataa aaataggggg acagttaaag 
      61 gaagctctct tagatacagg agcagatgat acagtattag aagacatgga tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggcttta tcaaagtaag acaatatgat 
     181 caagtaccca tagaaatttg tggacacaag gctataggta cagtgttaat aggacctacg 
     241 cctgtcaaca taattggaag aaacatgttg actcagcttg gttgtacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttgaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga ggaaaaaata aaagcattag cagaaatttg tacagatatg 
     421 gaaaaggaag gaaaaatttc aagaattggg cctgaaaatc catacaatac tccagtattt 
     481 gccataaaga aaaaggacag tactaaatgg aggaaattag tagatttcag agaacttaat 
     541 aaaagaactc aagatttttg ggaggtgcaa ttaggaatac cacaccctgc agggttaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggggatgcat atttttcagt tcccttagat 
     661 aaagatttca ggaagtacac tgcattcacc atacccagta tcaacaatga gacaccagga 
     721 attaggtacc agtacaatgt gcttccacaa ggatggaaag gatcaccagc aatattccaa 
     781 tgtagcatga caaaaatctt agatcccttt agaacaaaaa atccagacat agttatctac 
     841 caatacatgg atgatttgta tgtagggtct gatttagaaa tagggcagca tagagcaaaa 
     901 atagaggagt taagagaaca tctactgcaa tggggatttc ctacaccaga caaaaaacat 
     961 caaaag
//
last modified: Tue May 31 10:56 2022


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