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LOCUS AY223751 2577 bp RNA linear VRL 11-JUN-2003
DEFINITION HIV-1 clone WEAU1166-39 envelope glycoprotein (env) gene, complete
cds
ACCESSION AY223751
VERSION AY223751.1 GI:31581902
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2577)
Show all sequences for reference 1
AUTHORS Wei,X. and Shaw,G.M.
TITLE Direct Submission
JOURNAL Submitted (22-JAN-2003) Medicine, HHMI, University of Alabama at
Birmingham, 720 South 20th Street, Kaul 816, Birmingham, AL
35294-0024, USA
REFERENCE 2
Show all sequences for reference 2
AUTHORS Wei,X., Decker,J.M., Wang,S., Hui,H., Kappes,J.C., Wu,X.,
Salazar-Gonzalez,J.F., Salazar,M.G., Kilby,J.M., Saag,M.S.,
Komarova,N.L., Nowak,M.A., Hahn,B.H., Kwong,P.D. and Shaw,G.M.
TITLE Antibody neutralization and escape by HIV-1
JOURNAL Nature 422 (6929), 307-312 (2003)
PUBMED 12646921
COMMENT Details regarding the patient are given in the comments for
accession U21135.
FEATURES Location/Qualifiers
source 1..2577
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolation_source="plasma from patient WEAU"
/db_xref="taxon:11676"
/clone="WEAU1166-39"
/note="clones are labeled as follows: WEAUxxx-yyy. where
xxx indicate the number of days after onset of symptoms
and yyy the clone number"
gene 1..2577
/gene="env"
CDS 1..2577
/gene="env"
/note="gp160"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAP57351.1"
/db_xref="GI:31581903"
/translation="MRVKGIRKNYQHLWKWGIMLLGILMICNATENLWVTVYYGVPVW
KEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVMENVTENFNMWKNNMVEQ
MHEDIISLWDQSLKPCVKLTPLCVTLNCTNVNVTNLKNETNTNSRSGGEKMKEGEMKN
CSFNVTTLIRNKRKTEYALFYKLDVMPIDNDDTSYTLRNCNSSTITQACPKVSFEPIP
IHFCAPAGFAILKCNDKKFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEDIVI
RSENFMDNAKNIIVQLNASIKINCIRPNNNTRKGITLGPGRVLYTTGEIIGDIRQAHC
NLSRTSWNNTLKQIVKKLREIEQFKNKTIVFKQSSGGDPEIVMHSFNCGGEFFYCNST
QLFNSTWNATGTWNDTEGADNNITLPCRIKQIINRWQEVGKAMYAPPIEGQIRCLSNI
TGLLLTRDGGNEGNQTEIFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQ
REKRAVGTLGAMFLGFLGAAGSTMGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQH
LLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTTVPWNASWSNKSQDYI
WNNMTWMEWEREINNYTGLIYNLIEESQNQQEKNEQELLELDKWEKLWNWFDISNWLW
YIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTHLPAPRGPDRPEGIEEEGG
ERDRDRSGRLVDGFLTLIWVDLRRLCLFLYHRLIDLLLIAKRIVELLGRRGWEALKYC
WNLLQYWSQEIRNSAVSLLNATAIAVAEGTDRVIEIVQRTCRAILRIPRRIRQGLERA
LQ"
BASE COUNT 911 a 428 c 607 g 631 t
ORIGIN
1 atgagagtga aggggatcag gaagaattat cagcacttgt ggaaatgggg catcatgctc
61 cttgggatat tgatgatctg taatgctaca gaaaacttgt gggtcacagt ctattatggg
121 gtacctgtgt ggaaagaagc aacaaccact ctattttgtg catcagatgc taaagcatat
181 gatacagaag tacataatgt ttgggccaca catgcctgtg tacccacaga ccccaaccca
241 caagaagtag taatggaaaa tgtgacagaa aattttaaca tgtggaaaaa taacatggta
301 gaacagatgc atgaagatat aattagttta tgggatcaaa gcctaaaacc atgtgtaaaa
361 ttaaccccac tctgtgttac tttaaattgc actaatgtga atgtgactaa tttgaagaat
421 gagactaata ccaatagtag aagtggaggg gagaagatga aggagggaga aatgaaaaac
481 tgctctttca atgtcaccac actcataaga aataagagaa agactgaata tgcacttttt
541 tataaacttg atgtaatgcc aatagataat gatgatacaa gctatacatt gagaaattgt
601 aactcctcaa ccattacaca ggcctgtcca aaggtatcct ttgaaccaat tcccatacat
661 ttttgtgctc cggctggttt tgcgattcta aagtgtaatg ataagaagtt caatggaacg
721 ggaccctgta aaaatgtcag cacagtacaa tgtacacacg gaattagacc agtagtatca
781 acccaattgc tgttaaatgg cagtctagca gaagaagaca tagtgattag atctgaaaat
841 ttcatggaca atgctaaaaa cataatagta cagctgaatg catccataaa aattaattgt
901 ataagaccca acaacaatac aagaaaaggg ataactttag gaccagggag agtactttat
961 acaacaggag aaataatagg agatataaga caagcacatt gtaaccttag tagaacaagt
1021 tggaataaca ctttaaaaca gatagttaaa aaattaagag aaatagaaca atttaagaat
1081 aaaacaatag tttttaaaca atcctcagga ggggacccag aaattgtaat gcacagtttt
1141 aattgtggag gggaattttt ctactgtaat tcaacacagc tgtttaatag tacttggaat
1201 gctactggta cttggaatga tactgaaggg gcagataaca atatcacact cccatgcaga
1261 ataaaacaaa ttataaacag gtggcaggaa gtaggaaaag caatgtatgc cccacccatc
1321 gaaggacaga ttagatgttt atcaaatatt acagggttac tattaacaag agatggtggt
1381 aatgaaggga accagaccga gatcttcaga cctggaggag gaaatatgaa ggataattgg
1441 agaagtgaat tatataaata taaagtagta aaaattgaac cattaggagt agcacccacc
1501 aaggcaaaga gaagagtggt gcagagagaa aaaagagcag tgggaacgct aggagctatg
1561 ttccttgggt tcttgggagc agcaggaagc actatgggcg cagcgtcaat gacgctgacg
1621 gtacaggcca gactattatt gtctggtata gtgcaacagc agaacaatct gctgagggct
1681 attgaggcgc aacagcatct gttgcaactc acagtctggg gcatcaaaca gctccaggca
1741 agagtcctgg ctgtggagag atacctaagg gatcagcagc tcctggggat ttggggttgc
1801 tctggaaaac tcatctgcac cactactgtg ccttggaatg ctagttggag taataaatct
1861 caggattaca tttggaataa catgacctgg atggagtggg agagagaaat taacaattac
1921 acaggcttaa tatacaactt aattgaagaa tcgcagaacc aacaagaaaa aaatgagcaa
1981 gaattattgg aattggataa atgggaaaag ttgtggaatt ggtttgacat atcaaactgg
2041 ctgtggtata taaaaatctt cataatgata gtaggaggct tgatcggttt aagaatagtt
2101 tttactgtac tttccatagt aaatagagtt aggcagggat actcaccatt gtcatttcag
2161 acccacctcc cagccccgag gggacccgac aggcccgaag gaatcgaaga agaaggtgga
2221 gagagagaca gagacagatc cggaagatta gtggatggat tcttaacact tatctgggtc
2281 gacctgcggc gcctgtgtct cttcctctac caccgcttga tcgacttact cttgattgca
2341 aagaggattg tggaacttct gggacgcagg gggtgggaag ctctcaaata ttgttggaat
2401 ctcctgcagt attggagcca ggaaataagg aatagtgctg ttagtttgct taatgccaca
2461 gctatagcag tagctgaagg gacagatagg gttatagaaa tagtgcaaag aacttgtaga
2521 gctattctcc gcatacctag aagaataaga cagggcttag aaagggcttt gcaataa
//
last modified: Tue May 31 10:56 2022